#include <processor.h>
Inheritance diagram for EMAN::PeakOnlyProcessor:
Public Member Functions | |
string | get_name () const |
Get the processor's name. | |
void | set_params (const Dict &new_params) |
Set the processor parameters using a key/value dictionary. | |
TypeDict | get_param_types () const |
Get processor parameter information in a dictionary. | |
string | get_desc () const |
Get the descrition of this specific processor. | |
Static Public Member Functions | |
static Processor * | NEW () |
Static Public Attributes | |
static const string | NAME = "mask.onlypeaks" |
Protected Member Functions | |
void | process_pixel (float *pixel, const float *data, int n) const |
Private Attributes | |
int | npeaks |
npeaks | the number of surrounding peaks allow to >= pixel values |
Definition at line 3166 of file processor.h.
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Get the descrition of this specific processor. This function must be overwritten by a subclass.
Implements EMAN::Processor. Definition at line 3193 of file processor.h. 03194 { 03195 return "peak processor -> if npeaks or more surrounding values >= value, value->0"; 03196 }
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Get the processor's name. Each processor is identified by a unique name.
Implements EMAN::Processor. Definition at line 3169 of file processor.h. References NAME. 03170 { 03171 return NAME; 03172 }
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Get processor parameter information in a dictionary. Each parameter has one record in the dictionary. Each record contains its name, data-type, and description.
Reimplemented from EMAN::BoxStatProcessor. Definition at line 3186 of file processor.h. References EMAN::EMObject::INT, and EMAN::TypeDict::put(). 03187 { 03188 TypeDict d; 03189 d.put("npeaks", EMObject::INT, "the number of surrounding peaks allow to >= pixel values"); 03190 return d; 03191 }
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Definition at line 3173 of file processor.h. 03174 { 03175 return new PeakOnlyProcessor(); 03176 }
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Implements EMAN::BoxStatProcessor. Definition at line 3201 of file processor.h. References npeaks. 03202 { 03203 int r = 0; 03204 03205 for (int i = 0; i < n; i++) 03206 { 03207 if (data[i] >= *pixel) { 03208 r++; 03209 } 03210 } 03211 03212 if (r > npeaks) 03213 { 03214 *pixel = 0; 03215 } 03216 }
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Set the processor parameters using a key/value dictionary.
Reimplemented from EMAN::Processor. Definition at line 3177 of file processor.h. References npeaks, and EMAN::Processor::params. 03178 { 03179 params = new_params; 03180 npeaks = params["npeaks"]; 03181 if (npeaks == 0) { 03182 npeaks = 1; 03183 } 03184 }
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Definition at line 3198 of file processor.h. Referenced by get_name(). |
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Definition at line 3218 of file processor.h. Referenced by process_pixel(), and set_params(). |