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EMAN::RealToFFTProcessor Class Reference

This will replace the image with a full-circle 2D fft amplitude rendering. More...

#include <processor.h>

Inheritance diagram for EMAN::RealToFFTProcessor:

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Collaboration diagram for EMAN::RealToFFTProcessor:

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List of all members.

Public Member Functions

void process_inplace (EMData *image)
 To process an image in-place.
string get_name () const
 Get the processor's name.
string get_desc () const
 Get the descrition of this specific processor.

Static Public Member Functions

ProcessorNEW ()

Static Public Attributes

const string NAME = "math.realtofft"

Detailed Description

This will replace the image with a full-circle 2D fft amplitude rendering.

Definition at line 3562 of file processor.h.


Member Function Documentation

string EMAN::RealToFFTProcessor::get_desc  )  const [inline, virtual]
 

Get the descrition of this specific processor.

This function must be overwritten by a subclass.

Returns:
The description of this processor.

Implements EMAN::Processor.

Definition at line 3577 of file processor.h.

03578                 {
03579                         return "This will replace the image with a full-circle 2D fft amplitude rendering. Note that this renders amplitude, when intensity is more common.";
03580                 }

string EMAN::RealToFFTProcessor::get_name  )  const [inline, virtual]
 

Get the processor's name.

Each processor is identified by a unique name.

Returns:
The processor's name.

Implements EMAN::Processor.

Definition at line 3567 of file processor.h.

Referenced by process_inplace().

03568                 {
03569                         return NAME;
03570                 }

Processor* EMAN::RealToFFTProcessor::NEW  )  [inline, static]
 

Definition at line 3572 of file processor.h.

03573                 {
03574                         return new RealToFFTProcessor();
03575                 }

void RealToFFTProcessor::process_inplace EMData image  )  [virtual]
 

To process an image in-place.

For those processors which can only be processed out-of-place, override this function to just print out some error message to remind user call the out-of-place version.

Parameters:
image The image to be processed.

Implements EMAN::Processor.

Definition at line 2826 of file processor.cpp.

References EMAN::EMData::do_fft(), get_name(), EMAN::EMData::get_value_at(), EMAN::EMData::get_xsize(), EMAN::EMData::get_ysize(), EMAN::EMData::get_zsize(), ImageDimensionException, ImageFormatException, EMAN::EMData::is_complex(), LOGERR, LOGWARN, norm(), nx, ny, EMAN::EMData::ri2ap(), EMAN::EMData::set_value_at(), EMAN::EMData::update(), x, and y.

02827 {
02828         if (!image) {
02829                 LOGWARN("NULL Image");
02830                 return;
02831         }
02832 
02833         //Note : real image only!
02834         if(image->is_complex()) {
02835                 LOGERR("%s Processor only operates on real images", get_name().c_str());
02836                 throw ImageFormatException("apply to real image only");
02837         }
02838 
02839         // Note : 2D only!
02840         int nz = image->get_zsize();
02841         if (nz > 1) {
02842                 LOGERR("%s Processor doesn't support 3D models", get_name().c_str());
02843                 throw ImageDimensionException("3D model not supported");
02844         }
02845 
02846         EMData *ff=image->do_fft();
02847         ff->ri2ap();
02848 
02849         int nx=image->get_xsize();
02850         int ny=image->get_ysize();
02851 
02852         int x,y;
02853         float norm=static_cast<float>(nx*ny);
02854 
02855         for (y=0; y<ny; y++) image->set_value_at(0,y,0);
02856 
02857         for (x=1; x<nx/2; x++) {
02858                 for (y=0; y<ny; y++) {
02859                         int y2;
02860                         if (y<ny/2) y2=y+ny/2;
02861                         else if (y==ny/2) y2=ny;
02862                         else y2=y-ny/2;
02863                         image->set_value_at(x,y,ff->get_value_at(nx-x*2,ny-y2)/norm);
02864                 }
02865         }
02866 
02867         for (x=nx/2; x<nx; x++) {
02868                 for (y=0; y<ny; y++) {
02869                         int y2;
02870                         if (y<ny/2) y2=y+ny/2;
02871                         else y2=y-ny/2;
02872                         image->set_value_at(x,y,ff->get_value_at(x*2-nx,y2)/norm);
02873                 }
02874         }
02875 
02876         image->update();
02877         if( ff )
02878         {
02879                 delete ff;
02880                 ff = 0;
02881         }
02882 }


Member Data Documentation

const string RealToFFTProcessor::NAME = "math.realtofft" [static]
 

Definition at line 128 of file processor.cpp.


The documentation for this class was generated from the following files:
Generated on Thu Dec 9 13:48:00 2010 for EMAN2 by  doxygen 1.3.9.1