#include <processor.h>
Inheritance diagram for EMAN::IndexMaskFileProcessor:
Public Member Functions | |
virtual void | process_inplace (EMData *image) |
To process an image in-place. | |
virtual string | get_name () const |
Get the processor's name. | |
virtual TypeDict | get_param_types () const |
Get processor parameter information in a dictionary. | |
virtual string | get_desc () const |
Get the descrition of this specific processor. | |
Static Public Member Functions | |
Processor * | NEW () |
Static Public Attributes | |
const string | NAME = "mask.fromfile" |
The images must be same size. If 'ismaskset=' is 1, it will take a file containing a set of masks and apply the first mask to the image.
filename | mask image file name | |
ismaskset | If set to 1, it will take a file containing a set of masks and apply the first mask to the image |
Definition at line 5304 of file processor.h.
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Get the descrition of this specific processor. This function must be overwritten by a subclass.
Implements EMAN::Processor. Definition at line 5327 of file processor.h. 05328 { 05329 return "Multiplies the image by the specified file using pixel indices. The images must be same size. If 'ismaskset=' is 1, it will take a file containing a set of masks and apply the first mask to the image."; 05330 }
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Get the processor's name. Each processor is identified by a unique name.
Implements EMAN::Processor. Definition at line 5309 of file processor.h. 05310 {
05311 return NAME;
05312 }
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Get processor parameter information in a dictionary. Each parameter has one record in the dictionary. Each record contains its name, data-type, and description.
Reimplemented from EMAN::Processor. Definition at line 5319 of file processor.h. References EMAN::TypeDict::put(). 05320 { 05321 TypeDict d; 05322 d.put("filename", EMObject::STRING, "mask image file name"); 05323 d.put("ismaskset", EMObject::INT, "If set to 1, it will take a file containing a set of masks and apply the first mask to the image"); 05324 return d; 05325 }
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Definition at line 5314 of file processor.h. 05315 { 05316 return new IndexMaskFileProcessor(); 05317 }
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To process an image in-place. For those processors which can only be processed out-of-place, override this function to just print out some error message to remind user call the out-of-place version.
Implements EMAN::Processor. Definition at line 5994 of file processor.cpp. References EMAN::EMUtil::is_same_size(), LOGERR, LOGWARN, EMAN::EMData::mult(), EMAN::EMData::process_inplace(), and EMAN::EMData::read_image(). 05995 { 05996 if (!image) { 05997 LOGWARN("NULL Image"); 05998 return; 05999 } 06000 06001 const char *filename = params["filename"]; 06002 EMData *msk = new EMData(); 06003 msk->read_image(filename); 06004 if (!EMUtil::is_same_size(image, msk)) { 06005 LOGERR("IndexMaskFileProcessor: Mask size different than image"); 06006 return; 06007 } 06008 06009 if ((int) params["ismaskset"] != 0) { 06010 msk->process_inplace("threshold.binaryrange", Dict("low", 0.5f, "high", 1.5f)); 06011 } 06012 06013 image->mult(*msk); 06014 if( msk ) 06015 { 06016 delete msk; 06017 msk = 0; 06018 } 06019 }
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Definition at line 183 of file processor.cpp. |