#include <processor.h>
Inheritance diagram for EMAN::IndexMaskFileProcessor:
Public Member Functions | |
virtual void | process_inplace (EMData *image) |
To process an image in-place. | |
virtual string | get_name () const |
Get the processor's name. | |
virtual TypeDict | get_param_types () const |
Get processor parameter information in a dictionary. | |
virtual string | get_desc () const |
Get the descrition of this specific processor. | |
Static Public Member Functions | |
Processor * | NEW () |
Static Public Attributes | |
const string | NAME = "mask.fromfile" |
The images must be same size. If 'ismaskset=' is 1, it will take a file containing a set of masks and apply the first mask to the image.
filename | mask image file name | |
ismaskset | If set to 1, it will take a file containing a set of masks and apply the first mask to the image |
Definition at line 5335 of file processor.h.
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Get the descrition of this specific processor. This function must be overwritten by a subclass.
Implements EMAN::Processor. Definition at line 5358 of file processor.h. 05359 { 05360 return "Multiplies the image by the specified file using pixel indices. The images must be same size. If 'ismaskset=' is 1, it will take a file containing a set of masks and apply the first mask to the image."; 05361 }
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Get the processor's name. Each processor is identified by a unique name.
Implements EMAN::Processor. Definition at line 5340 of file processor.h. 05341 {
05342 return NAME;
05343 }
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Get processor parameter information in a dictionary. Each parameter has one record in the dictionary. Each record contains its name, data-type, and description.
Reimplemented from EMAN::Processor. Definition at line 5350 of file processor.h. References EMAN::TypeDict::put(). 05351 { 05352 TypeDict d; 05353 d.put("filename", EMObject::STRING, "mask image file name"); 05354 d.put("ismaskset", EMObject::INT, "If set to 1, it will take a file containing a set of masks and apply the first mask to the image"); 05355 return d; 05356 }
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Definition at line 5345 of file processor.h. 05346 { 05347 return new IndexMaskFileProcessor(); 05348 }
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To process an image in-place. For those processors which can only be processed out-of-place, override this function to just print out some error message to remind user call the out-of-place version.
Implements EMAN::Processor. Definition at line 6080 of file processor.cpp. References EMAN::EMUtil::is_same_size(), LOGERR, LOGWARN, EMAN::EMData::mult(), EMAN::EMData::process_inplace(), and EMAN::EMData::read_image(). 06081 { 06082 if (!image) { 06083 LOGWARN("NULL Image"); 06084 return; 06085 } 06086 06087 const char *filename = params["filename"]; 06088 EMData *msk = new EMData(); 06089 msk->read_image(filename); 06090 if (!EMUtil::is_same_size(image, msk)) { 06091 LOGERR("IndexMaskFileProcessor: Mask size different than image"); 06092 return; 06093 } 06094 06095 if ((int) params["ismaskset"] != 0) { 06096 msk->process_inplace("threshold.binaryrange", Dict("low", 0.5f, "high", 1.5f)); 06097 } 06098 06099 image->mult(*msk); 06100 if( msk ) 06101 { 06102 delete msk; 06103 msk = 0; 06104 } 06105 }
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Definition at line 178 of file processor.cpp. |