#include <reconstructor.h>
Inheritance diagram for EMAN::nnSSNR_ctfReconstructor:
Public Member Functions | |
nnSSNR_ctfReconstructor () | |
nnSSNR_ctfReconstructor (const string &symmetry, int size, int npad, float snr, int sign) | |
~nnSSNR_ctfReconstructor () | |
virtual void | setup () |
Initialize the reconstructor. | |
virtual int | insert_slice (const EMData *const slice, const Transform &euler, const float weight=1.0) |
Insert a slice into a 3D volume, in a given orientation. | |
virtual EMData * | finish (bool doift=true) |
Finish reconstruction and return the complete model. | |
virtual string | get_name () const |
Get the unique name of this class (especially for factory based instantiation access). | |
virtual string | get_desc () const |
Get a clear, concise description of this class. | |
TypeDict | get_param_types () const |
void | setup (const string &symmetry, int size, int npad, float snr, int sign) |
int | insert_padfft_slice (EMData *padded, const Transform &trans, int mult=1) |
Static Public Member Functions | |
static Reconstructor * | NEW () |
Static Public Attributes | |
static const string | NAME = "nnSSNR_ctf" |
Private Member Functions | |
void | buildFFTVolume () |
void | buildNormVolume () |
void | buildNorm2Volume () |
void | buildNorm3Volume () |
Private Attributes | |
EMData * | m_volume |
EMData * | m_wptr |
EMData * | m_wptr2 |
EMData * | m_wptr3 |
string | m_symmetry |
int | m_weighting |
int | m_vnx |
int | m_vny |
int | m_vnz |
int | m_npad |
int | m_nsym |
int | m_vnzp |
int | m_vnyp |
int | m_vnxp |
int | m_vnzc |
int | m_vnyc |
int | m_vnxc |
float | m_wghta |
float | m_wghtb |
int | m_sign |
float | m_snr |
int | wiener |
Definition at line 1399 of file reconstructor.h.
nnSSNR_ctfReconstructor::nnSSNR_ctfReconstructor | ( | ) |
nnSSNR_ctfReconstructor::nnSSNR_ctfReconstructor | ( | const string & | symmetry, | |
int | size, | |||
int | npad, | |||
float | snr, | |||
int | sign | |||
) |
nnSSNR_ctfReconstructor::~nnSSNR_ctfReconstructor | ( | ) |
Definition at line 3772 of file reconstructor.cpp.
03773 { 03774 03775 //if( m_delete_volume ) checked_delete(m_volume); 03776 //if( m_delete_weight ) checked_delete( m_wptr ); 03777 //if( m_delete_weight2 ) checked_delete( m_wptr2 ); 03778 //if( m_delete_weight3 ) checked_delete( m_wptr3 ); 03779 //checked_delete( m_result ); 03780 }
void nnSSNR_ctfReconstructor::buildFFTVolume | ( | ) | [private] |
Definition at line 3827 of file reconstructor.cpp.
References m_npad, m_vnxc, m_vnxp, m_vnyp, m_vnzp, m_volume, EMAN::FactoryBase::params, EMAN::EMData::set_array_offsets(), EMAN::EMData::set_attr(), EMAN::EMData::set_complex(), EMAN::EMData::set_fftodd(), EMAN::EMData::set_fftpad(), EMAN::EMData::set_nxc(), EMAN::EMData::set_ri(), EMAN::EMData::set_size(), and EMAN::EMData::to_zero().
Referenced by setup().
03827 { 03828 03829 int offset = 2 - m_vnxp%2; 03830 m_volume = params["fftvol"]; 03831 03832 m_volume->set_size(m_vnxp+offset,m_vnyp,m_vnzp); 03833 m_volume->to_zero(); 03834 03835 m_volume->set_fftodd(m_vnxp % 2); 03836 03837 m_volume->set_nxc(m_vnxc); 03838 m_volume->set_complex(true); 03839 m_volume->set_ri(true); //(real, imaginary) instead of polar coordinate 03840 m_volume->set_fftpad(true); 03841 m_volume->set_attr("npad", m_npad); 03842 m_volume->set_array_offsets(0,1,1); 03843 }
void nnSSNR_ctfReconstructor::buildNorm2Volume | ( | ) | [private] |
Definition at line 3854 of file reconstructor.cpp.
References m_vnxc, m_vnyp, m_vnzp, m_wptr2, EMAN::FactoryBase::params, EMAN::EMData::set_array_offsets(), EMAN::EMData::set_size(), and EMAN::EMData::to_zero().
Referenced by setup().
03854 { 03855 03856 m_wptr2 = params["weight2"]; 03857 m_wptr2->set_size(m_vnxc+1,m_vnyp,m_vnzp); 03858 m_wptr2->to_zero(); 03859 m_wptr2->set_array_offsets(0,1,1); 03860 }
void nnSSNR_ctfReconstructor::buildNorm3Volume | ( | ) | [private] |
Definition at line 3862 of file reconstructor.cpp.
References m_vnxc, m_vnyp, m_vnzp, m_wptr3, EMAN::FactoryBase::params, EMAN::EMData::set_array_offsets(), EMAN::EMData::set_size(), and EMAN::EMData::to_zero().
Referenced by setup().
03862 { 03863 03864 m_wptr3 = params["weight3"]; 03865 m_wptr3->set_size(m_vnxc+1,m_vnyp,m_vnzp); 03866 m_wptr3->to_zero(); 03867 m_wptr3->set_array_offsets(0,1,1); 03868 }
void nnSSNR_ctfReconstructor::buildNormVolume | ( | ) | [private] |
Definition at line 3846 of file reconstructor.cpp.
References m_vnxc, m_vnyp, m_vnzp, m_wptr, EMAN::FactoryBase::params, EMAN::EMData::set_array_offsets(), EMAN::EMData::set_size(), and EMAN::EMData::to_zero().
Referenced by setup().
03847 { 03848 m_wptr = params["weight"]; 03849 m_wptr->set_size(m_vnxc+1,m_vnyp,m_vnzp); 03850 m_wptr->to_zero(); 03851 m_wptr->set_array_offsets(0,1,1); 03852 }
EMData * nnSSNR_ctfReconstructor::finish | ( | bool | doift = true |
) | [virtual] |
Finish reconstruction and return the complete model.
doift | A flag indicating whether the returned object should be guaranteed to be in real-space (true) or should be left in whatever space the reconstructor generated |
Reimplemented from EMAN::Reconstructor.
Definition at line 3909 of file reconstructor.cpp.
References abs, EMAN::EMData::cmplx(), ESTIMATE, m_vnxc, m_vnxp, m_vnyc, m_vnyp, m_vnzc, m_vnzp, m_volume, m_weighting, m_wghta, m_wptr, m_wptr2, m_wptr3, max, max3d(), nn(), norm(), EMAN::FactoryBase::params, EMAN::Util::round(), EMAN::EMData::set_complex(), EMAN::EMData::set_fftodd(), EMAN::EMData::set_fftpad(), EMAN::EMData::set_nxc(), EMAN::EMData::set_ri(), EMAN::EMData::set_size(), sqrt(), EMAN::EMData::symplane2(), EMAN::EMData::to_zero(), and EMAN::EMData::update().
03910 { 03911 /* 03912 I changed the code on 05/15/2008 so it only returns variance. 03913 Lines commented out are marked by //# 03914 The version prior to the currect changes is r1.190 03915 PAP 03916 */ 03917 /*** 03918 m_volume ctf*(P^2D->3D(F^3D)) 03919 m_wptr ctf^2 03920 m_wptr2 |P^2D->3D(F^3D)|^2 03921 m_wptr3 Kn 03922 nominator = sum_rot [ wght*signal ] 03923 denominator = sum_rot[ wght*variance ] 03924 ***/ 03925 int kz, ky; 03926 int box = 7; 03927 int kc = (box-1)/2; 03928 float alpha = 0.0; 03929 float argx, argy, argz; 03930 vector< float > pow_a( 3*kc+1, 1.0 ); 03931 float w = params["w"]; 03932 float dx2 = 1.0f/float(m_vnxc)/float(m_vnxc); 03933 float dy2 = 1.0f/float(m_vnyc)/float(m_vnyc); 03934 #ifdef _WIN32 03935 float dz2 = 1.0f/_cpp_max(float(m_vnzc),1.0f)/_cpp_max(float(m_vnzc),1.0f); 03936 int inc = Util::round(float(_cpp_max(_cpp_max(m_vnxc,m_vnyc),m_vnzc))/w); 03937 #else 03938 float dz2 = 1.0f/std::max(float(m_vnzc),1.0f)/std::max(float(m_vnzc),1.0f); 03939 int inc = Util::round(float(std::max(std::max(m_vnxc,m_vnyc),m_vnzc))/w); 03940 #endif //_WIN32 03941 03942 EMData* SSNR = params["SSNR"]; 03943 SSNR->set_size(inc+1,4,1); 03944 //#EMData* vol_ssnr = new EMData(); 03945 //#vol_ssnr->set_size(m_vnxp, m_vnyp, m_vnzp); 03946 //#vol_ssnr->to_zero(); 03947 //# new linea follow 03948 EMData* vol_ssnr = params["vol_ssnr"]; 03949 vol_ssnr->set_size(m_vnxp+ 2 - m_vnxp%2, m_vnyp ,m_vnzp); 03950 vol_ssnr->to_zero(); 03951 if ( m_vnxp % 2 == 0 ) vol_ssnr->set_fftodd(0); 03952 else vol_ssnr->set_fftodd(1); 03953 vol_ssnr->set_nxc(m_vnxc); 03954 vol_ssnr->set_complex(true); 03955 vol_ssnr->set_ri(true); 03956 vol_ssnr->set_fftpad(false); 03957 //# 03958 float *nom = new float[inc+1]; 03959 float *denom = new float[inc+1]; 03960 int *ka = new int[inc+1]; 03961 int *nn = new int[inc+1]; 03962 float wght = 1.f; 03963 for (int i = 0; i <= inc; i++) { 03964 nom[i] = 0.0f; 03965 denom[i] = 0.0f; 03966 nn[i] = 0; 03967 ka[i] = 0; 03968 } 03969 m_volume->symplane2(m_wptr, m_wptr2, m_wptr3); 03970 if ( m_weighting == ESTIMATE ) { 03971 int vol = box*box*box; 03972 for( unsigned int i=1; i < pow_a.size(); ++i ) pow_a[i] = pow_a[i-1] * exp(m_wghta); 03973 pow_a[3*kc] = 0.0; 03974 float max = max3d( kc, pow_a ); 03975 alpha = ( 1.0f - 1.0f/(float)vol ) / max; 03976 } 03977 for (int iz = 1; iz <= m_vnzp; iz++) { 03978 if ( iz-1 > m_vnzc ) kz = iz-1-m_vnzp; else kz = iz-1; 03979 argz = float(kz*kz)*dz2; 03980 for (int iy = 1; iy <= m_vnyp; iy++) { 03981 if ( iy-1 > m_vnyc ) ky = iy-1-m_vnyp; else ky = iy-1; 03982 argy = argz + float(ky*ky)*dy2; 03983 for (int ix = 0; ix <= m_vnxc; ix++) { 03984 float Kn = (*m_wptr3)(ix,iy,iz); 03985 argx = std::sqrt(argy + float(ix*ix)*dx2); 03986 int r = Util::round(float(inc)*argx); 03987 if ( r >= 0 && Kn > 4.5f ) { 03988 if ( m_weighting == ESTIMATE ) { 03989 int cx = ix; 03990 int cy = (iy<=m_vnyc) ? iy - 1 : iy - 1 - m_vnyp; 03991 int cz = (iz<=m_vnzc) ? iz - 1 : iz - 1 - m_vnzp; 03992 float sum = 0.0; 03993 for( int ii = -kc; ii <= kc; ++ii ) { 03994 int nbrcx = cx + ii; 03995 if( nbrcx >= m_vnxc ) continue; 03996 for ( int jj= -kc; jj <= kc; ++jj ) { 03997 int nbrcy = cy + jj; 03998 if( nbrcy <= -m_vnyc || nbrcy >= m_vnyc ) continue; 03999 for( int kk = -kc; kk <= kc; ++kk ) { 04000 int nbrcz = cz + jj; 04001 if ( nbrcz <= -m_vnyc || nbrcz >= m_vnyc ) continue; 04002 if( nbrcx < 0 ) { 04003 nbrcx = -nbrcx; 04004 nbrcy = -nbrcy; 04005 nbrcz = -nbrcz; 04006 } 04007 int nbrix = nbrcx; 04008 int nbriy = nbrcy >= 0 ? nbrcy + 1 : nbrcy + 1 + m_vnyp; 04009 int nbriz = nbrcz >= 0 ? nbrcz + 1 : nbrcz + 1 + m_vnzp; 04010 if( (*m_wptr)( nbrix, nbriy, nbriz ) == 0 ) { 04011 int c = 3*kc+1 - std::abs(ii) - std::abs(jj) - std::abs(kk); 04012 sum = sum + pow_a[c]; 04013 } 04014 } 04015 } 04016 } 04017 // int r = std::abs(cx) + std::abs(cy) + std::abs(cz); 04018 wght = 1.0f / ( 1.0f - alpha * sum ); 04019 } // end of ( m_weighting == ESTIMATE ) 04020 float nominator = std::norm(m_volume->cmplx(ix,iy,iz))/(*m_wptr)(ix,iy,iz); 04021 float denominator = ((*m_wptr2)(ix,iy,iz)-std::norm(m_volume->cmplx(ix,iy,iz))/(*m_wptr)(ix,iy,iz))/(Kn-1.0f); 04022 // Skip Friedel related values 04023 if( (ix>0 || (kz>=0 && (ky>=0 || kz!=0)))) { 04024 if ( r <= inc ) { 04025 nom[r] += nominator*wght; 04026 denom[r] += denominator/(*m_wptr)(ix,iy,iz)*wght; 04027 nn[r] += 2; 04028 ka[r] += int(Kn); 04029 } 04030 /* 04031 #ifdef _WIN32 04032 float tmp = _cpp_max(nominator/denominator/(*m_wptr)(ix,iy,iz)-1.0f,0.0f); 04033 #else 04034 float tmp = std::max(nominator/denominator/(*m_wptr)(ix,iy,iz)-1.0f,0.0f); 04035 #endif //_WIN32 04036 // Create SSNR as a 3D array (-n/2:n/2+n%2-1) 04037 int iix = m_vnxc + ix; int iiy = m_vnyc + ky; int iiz = m_vnzc + kz; 04038 if( iix >= 0 && iix < m_vnxp && iiy >= 0 && iiy < m_vnyp && iiz >= 0 && iiz < m_vnzp ) 04039 (*vol_ssnr)(iix, iiy, iiz) = tmp; 04040 // Friedel part 04041 iix = m_vnxc - ix; iiy = m_vnyc - ky; iiz = m_vnzc - kz; 04042 if( iix >= 0 && iix < m_vnxp && iiy >= 0 && iiy < m_vnyp && iiz >= 0 && iiz < m_vnzp ) 04043 (*vol_ssnr)(iix, iiy, iiz) = tmp; 04044 */ 04045 } 04046 (*vol_ssnr)(2*ix, iy-1, iz-1) = denominator*wght; 04047 } // end of Kn>4.5 or whatever 04048 } 04049 } 04050 } 04051 for (int i = 0; i <= inc; i++) { 04052 (*SSNR)(i,0,0) = nom[i]; 04053 (*SSNR)(i,1,0) = denom[i]; 04054 (*SSNR)(i,2,0) = static_cast<float>(nn[i]); 04055 (*SSNR)(i,3,0) = static_cast<float>(ka[i]); 04056 } 04057 vol_ssnr->update(); 04058 04059 delete[] nom; 04060 delete[] denom; 04061 delete[] nn; 04062 delete[] ka; 04063 04064 return 0; 04065 }
virtual string EMAN::nnSSNR_ctfReconstructor::get_desc | ( | ) | const [inline, virtual] |
Get a clear, concise description of this class.
Implements EMAN::FactoryBase.
Definition at line 1430 of file reconstructor.h.
virtual string EMAN::nnSSNR_ctfReconstructor::get_name | ( | ) | const [inline, virtual] |
Get the unique name of this class (especially for factory based instantiation access).
Implements EMAN::FactoryBase.
Definition at line 1425 of file reconstructor.h.
References NAME.
01426 { 01427 return NAME; 01428 }
TypeDict EMAN::nnSSNR_ctfReconstructor::get_param_types | ( | ) | const [inline, virtual] |
Implements EMAN::FactoryBase.
Definition at line 1440 of file reconstructor.h.
References EMAN::EMObject::EMDATA, EMAN::EMObject::FLOAT, EMAN::EMObject::INT, EMAN::TypeDict::put(), and EMAN::EMObject::STRING.
01441 { 01442 TypeDict d; 01443 d.put("size", EMObject::INT); 01444 d.put("npad", EMObject::INT); 01445 d.put("symmetry", EMObject::STRING); 01446 d.put("fftvol", EMObject::EMDATA); 01447 d.put("fftwvol", EMObject::EMDATA); 01448 d.put("weight", EMObject::EMDATA); 01449 d.put("weight2", EMObject::EMDATA); 01450 d.put("weight3", EMObject::EMDATA); 01451 d.put("SSNR", EMObject::EMDATA); 01452 d.put("vol_ssnr", EMObject::EMDATA); 01453 d.put("w", EMObject::FLOAT); 01454 d.put("sign", EMObject::INT); 01455 d.put("snr", EMObject::FLOAT); 01456 return d; 01457 }
int nnSSNR_ctfReconstructor::insert_padfft_slice | ( | EMData * | padded, | |
const Transform & | trans, | |||
int | mult = 1 | |||
) |
Definition at line 3895 of file reconstructor.cpp.
References Assert, m_nsym, m_symmetry, m_volume, m_wptr, m_wptr2, m_wptr3, EMAN::EMData::nn_SSNR_ctf(), and t.
Referenced by insert_slice().
03896 { 03897 Assert( padfft != NULL ); 03898 03899 // insert slice for all symmetry related positions 03900 for (int isym=0; isym < m_nsym; isym++) { 03901 Transform tsym = t.get_sym(m_symmetry, isym); 03902 m_volume->nn_SSNR_ctf(m_wptr, m_wptr2, m_wptr3, padfft, tsym, mult); 03903 } 03904 03905 return 0; 03906 }
int nnSSNR_ctfReconstructor::insert_slice | ( | const EMData *const | slice, | |
const Transform & | euler, | |||
const float | weight = 1.0 | |||
) | [virtual] |
Insert a slice into a 3D volume, in a given orientation.
slice | the image slice to be inserted into the 3D volume | |
euler | Euler angle of this image slice. | |
weight | A weighting factor for this slice, generally the number of particles in a class-average. May be ignored by some reconstructors |
NullPointerException | if the input EMData pointer is null | |
ImageFormatException | if the image is complex as opposed to real |
Reimplemented from EMAN::Reconstructor.
Definition at line 3870 of file reconstructor.cpp.
References Assert, checked_delete(), EMAN::EMData::get_attr_default(), EMAN::EMData::get_xsize(), EMAN::EMData::get_ysize(), insert_padfft_slice(), LOGERR, m_npad, m_vnx, mult(), EMAN::padfft_slice(), and t.
03870 { 03871 // sanity checks 03872 if (!slice) { 03873 LOGERR("try to insert NULL slice"); 03874 return 1; 03875 } 03876 int padffted= slice->get_attr_default("padffted", 0); 03877 if ( padffted==0 && (slice->get_xsize()!=slice->get_ysize() || slice->get_xsize()!=m_vnx) ) { 03878 // FIXME: Why doesn't this throw an exception? 03879 LOGERR("Tried to insert a slice that is the wrong size."); 03880 return 1; 03881 } 03882 EMData* padfft = NULL; 03883 03884 if( padffted != 0 ) padfft = new EMData(*slice); 03885 else padfft = padfft_slice( slice, t, m_npad ); 03886 03887 int mult= slice->get_attr_default("mult", 1); 03888 03889 Assert( mult > 0 ); 03890 insert_padfft_slice( padfft, t, mult ); 03891 03892 checked_delete( padfft ); 03893 return 0; 03894 }
static Reconstructor* EMAN::nnSSNR_ctfReconstructor::NEW | ( | ) | [inline, static] |
Definition at line 1435 of file reconstructor.h.
References nnSSNR_ctfReconstructor().
01436 { 01437 return new nnSSNR_ctfReconstructor(); 01438 }
void nnSSNR_ctfReconstructor::setup | ( | const string & | symmetry, | |
int | size, | |||
int | npad, | |||
float | snr, | |||
int | sign | |||
) |
Definition at line 3794 of file reconstructor.cpp.
References buildFFTVolume(), buildNorm2Volume(), buildNorm3Volume(), buildNormVolume(), ESTIMATE, EMAN::Transform::get_nsym(), m_npad, m_nsym, m_sign, m_snr, m_symmetry, m_vnx, m_vnxc, m_vnxp, m_vny, m_vnyc, m_vnyp, m_vnz, m_vnzc, m_vnzp, m_weighting, m_wghta, m_wghtb, and wiener.
03795 { 03796 03797 m_weighting = ESTIMATE; 03798 m_wghta = 0.2f; 03799 m_wghtb = 0.004f; 03800 wiener = 1; 03801 03802 m_symmetry = symmetry; 03803 m_npad = npad; 03804 m_nsym = Transform::get_nsym(m_symmetry); 03805 03806 m_sign = sign; 03807 m_snr = snr; 03808 03809 m_vnx = size; 03810 m_vny = size; 03811 m_vnz = size; 03812 03813 m_vnxp = size*npad; 03814 m_vnyp = size*npad; 03815 m_vnzp = size*npad; 03816 03817 m_vnxc = m_vnxp/2; 03818 m_vnyc = m_vnyp/2; 03819 m_vnzc = m_vnzp/2; 03820 03821 buildFFTVolume(); 03822 buildNormVolume(); 03823 buildNorm2Volume(); 03824 buildNorm3Volume(); 03825 }
void nnSSNR_ctfReconstructor::setup | ( | ) | [virtual] |
Initialize the reconstructor.
Implements EMAN::Reconstructor.
Definition at line 3782 of file reconstructor.cpp.
References EMAN::Dict::has_key(), EMAN::FactoryBase::params, sign, and EMAN::Gatan::to_str().
Referenced by nnSSNR_ctfReconstructor().
03783 { 03784 int size = params["size"]; 03785 int npad = params["npad"]; 03786 int sign = params["sign"]; 03787 float snr = params["snr"]; 03788 string symmetry; 03789 if( params.has_key("symmetry") ) symmetry = params["symmetry"].to_str(); 03790 else symmetry = "c1"; 03791 03792 setup( symmetry, size, npad, snr, sign ); 03793 }
int EMAN::nnSSNR_ctfReconstructor::m_npad [private] |
Definition at line 1472 of file reconstructor.h.
Referenced by buildFFTVolume(), insert_slice(), and setup().
int EMAN::nnSSNR_ctfReconstructor::m_nsym [private] |
int EMAN::nnSSNR_ctfReconstructor::m_sign [private] |
float EMAN::nnSSNR_ctfReconstructor::m_snr [private] |
string EMAN::nnSSNR_ctfReconstructor::m_symmetry [private] |
int EMAN::nnSSNR_ctfReconstructor::m_vnx [private] |
int EMAN::nnSSNR_ctfReconstructor::m_vnxc [private] |
Definition at line 1475 of file reconstructor.h.
Referenced by buildFFTVolume(), buildNorm2Volume(), buildNorm3Volume(), buildNormVolume(), finish(), and setup().
int EMAN::nnSSNR_ctfReconstructor::m_vnxp [private] |
Definition at line 1474 of file reconstructor.h.
Referenced by buildFFTVolume(), finish(), and setup().
int EMAN::nnSSNR_ctfReconstructor::m_vny [private] |
int EMAN::nnSSNR_ctfReconstructor::m_vnyc [private] |
int EMAN::nnSSNR_ctfReconstructor::m_vnyp [private] |
Definition at line 1474 of file reconstructor.h.
Referenced by buildFFTVolume(), buildNorm2Volume(), buildNorm3Volume(), buildNormVolume(), finish(), and setup().
int EMAN::nnSSNR_ctfReconstructor::m_vnz [private] |
int EMAN::nnSSNR_ctfReconstructor::m_vnzc [private] |
int EMAN::nnSSNR_ctfReconstructor::m_vnzp [private] |
Definition at line 1474 of file reconstructor.h.
Referenced by buildFFTVolume(), buildNorm2Volume(), buildNorm3Volume(), buildNormVolume(), finish(), and setup().
EMData* EMAN::nnSSNR_ctfReconstructor::m_volume [private] |
Definition at line 1465 of file reconstructor.h.
Referenced by buildFFTVolume(), finish(), insert_padfft_slice(), and nnSSNR_ctfReconstructor().
int EMAN::nnSSNR_ctfReconstructor::m_weighting [private] |
float EMAN::nnSSNR_ctfReconstructor::m_wghta [private] |
float EMAN::nnSSNR_ctfReconstructor::m_wghtb [private] |
EMData* EMAN::nnSSNR_ctfReconstructor::m_wptr [private] |
Definition at line 1466 of file reconstructor.h.
Referenced by buildNormVolume(), finish(), insert_padfft_slice(), and nnSSNR_ctfReconstructor().
EMData* EMAN::nnSSNR_ctfReconstructor::m_wptr2 [private] |
Definition at line 1467 of file reconstructor.h.
Referenced by buildNorm2Volume(), finish(), insert_padfft_slice(), and nnSSNR_ctfReconstructor().
EMData* EMAN::nnSSNR_ctfReconstructor::m_wptr3 [private] |
Definition at line 1468 of file reconstructor.h.
Referenced by buildNorm3Volume(), finish(), insert_padfft_slice(), and nnSSNR_ctfReconstructor().
const string nnSSNR_ctfReconstructor::NAME = "nnSSNR_ctf" [static] |
int EMAN::nnSSNR_ctfReconstructor::wiener [private] |