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aligner.h File Reference

#include "emobject.h"

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Namespaces

namespace  EMAN

Classes

class  EMAN::Aligner
 Aligner class defines image alignment method. More...
class  EMAN::TranslationalAligner
 Translational 2D Alignment using cross correlation. More...
class  EMAN::RotationalAligner
 rotational alignment using angular correlation More...
class  EMAN::RotatePrecenterAligner
 rotational alignment assuming centers are correct More...
class  EMAN::RotateTranslateAligner
 rotational, translational alignment More...
class  EMAN::RotateTranslateBestAligner
 rotational, translational alignment More...
class  EMAN::RotateFlipAligner
 rotational and flip alignment More...
class  EMAN::RotateTranslateFlipAligner
 rotational, translational and flip alignment More...
class  EMAN::RTFExhaustiveAligner
 rotational, translational and flip alignment using real-space methods. More...
class  EMAN::RTFSlowExhaustiveAligner
 rotational, translational and flip alignment using exhaustive search. More...
class  EMAN::RefineAligner
 refine alignment. More...
class  EMAN::Refine3DAligner
 Refine alignment. More...
class  EMAN::RT3DGridAligner
 rotational and translational alignment using a square qrid of Altitude and Azimuth values (the phi range is specifiable) This aligner is ported from the original tomohunter.py - it is less efficient than searching on the sphere (RT3DSphereAligner), but very useful if you want to search in a specific, small, local area. More...
class  EMAN::RT3DSphereAligner
 3D rotational and translational alignment using spherical sampling, can reduce the search space based on symmetry. More...
class  EMAN::CUDA_Aligner

Defines

#define eman__aligner_h__   1
 
Id
aligner.h,v 1.86 2010/04/01 16:09:43 zyang Exp


Functions

void dump_aligners ()
map< string, vector< string > > dump_aligners_list ()


Define Documentation

#define eman__aligner_h__   1
 

Id
aligner.h,v 1.86 2010/04/01 16:09:43 zyang Exp

Definition at line 37 of file aligner.h.


Function Documentation

void EMAN::dump_aligners  ) 
 

Definition at line 2208 of file aligner.cpp.

02209 {
02210         dump_factory < Aligner > ();
02211 }

map< string, vector< string > > EMAN::dump_aligners_list  ) 
 

Definition at line 2213 of file aligner.cpp.

02214 {
02215         return dump_factory_list < Aligner > ();
02216 }


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