#include <processor.h>
Inheritance diagram for EMAN::IndexMaskFileProcessor:
Public Member Functions | |
virtual void | process_inplace (EMData *image) |
To process an image in-place. | |
virtual string | get_name () const |
Get the processor's name. | |
virtual TypeDict | get_param_types () const |
Get processor parameter information in a dictionary. | |
virtual string | get_desc () const |
Get the descrition of this specific processor. | |
Static Public Member Functions | |
Processor * | NEW () |
Static Public Attributes | |
const string | NAME = "mask.fromfile" |
The images must be same size. If 'ismaskset=' is 1, it will take a file containing a set of masks and apply the first mask to the image.
filename | mask image file name | |
ismaskset | If set to 1, it will take a file containing a set of masks and apply the first mask to the image |
Definition at line 5299 of file processor.h.
|
Get the descrition of this specific processor. This function must be overwritten by a subclass.
Implements EMAN::Processor. Definition at line 5322 of file processor.h. 05323 { 05324 return "Multiplies the image by the specified file using pixel indices. The images must be same size. If 'ismaskset=' is 1, it will take a file containing a set of masks and apply the first mask to the image."; 05325 }
|
|
Get the processor's name. Each processor is identified by a unique name.
Implements EMAN::Processor. Definition at line 5304 of file processor.h. 05305 {
05306 return NAME;
05307 }
|
|
Get processor parameter information in a dictionary. Each parameter has one record in the dictionary. Each record contains its name, data-type, and description.
Reimplemented from EMAN::Processor. Definition at line 5314 of file processor.h. References EMAN::TypeDict::put(). 05315 { 05316 TypeDict d; 05317 d.put("filename", EMObject::STRING, "mask image file name"); 05318 d.put("ismaskset", EMObject::INT, "If set to 1, it will take a file containing a set of masks and apply the first mask to the image"); 05319 return d; 05320 }
|
|
Definition at line 5309 of file processor.h. 05310 { 05311 return new IndexMaskFileProcessor(); 05312 }
|
|
To process an image in-place. For those processors which can only be processed out-of-place, override this function to just print out some error message to remind user call the out-of-place version.
Implements EMAN::Processor. Definition at line 5900 of file processor.cpp. References EMAN::EMUtil::is_same_size(), LOGERR, LOGWARN, EMAN::EMData::mult(), EMAN::EMData::process_inplace(), and EMAN::EMData::read_image(). 05901 { 05902 if (!image) { 05903 LOGWARN("NULL Image"); 05904 return; 05905 } 05906 05907 const char *filename = params["filename"]; 05908 EMData *msk = new EMData(); 05909 msk->read_image(filename); 05910 if (!EMUtil::is_same_size(image, msk)) { 05911 LOGERR("IndexMaskFileProcessor: Mask size different than image"); 05912 return; 05913 } 05914 05915 if ((int) params["ismaskset"] != 0) { 05916 msk->process_inplace("threshold.binaryrange", Dict("low", 0.5f, "high", 1.5f)); 05917 } 05918 05919 image->mult(*msk); 05920 if( msk ) 05921 { 05922 delete msk; 05923 msk = 0; 05924 } 05925 }
|
|
Definition at line 177 of file processor.cpp. |