<input 1> | First input (MRC only!) |
<input 2> | Second input (MRC only!) |
<output> | <input 1> aligned to <input 2> |
[transform=<dx,dy,rot,scale>] | use the given transform, rot in degree |
[mrc8bit] | Output 8-bit MRC file to conserve space |
alignhuge im0221.mrc im0222.mrc
This will determine the relative alignment parameters between two very large images. It's designed for use with 'identical' images (except for defocus), ie - a focal series. It will output the aligned image and display the rotation/translation parameters.