<particles> | Raw particle filespec (must have a .cl. version) |
<refrences> | Reference image filespec (must have a .cl. version) |
[assigneuler] | Assigns Eulers to each raw image |
[eulerinref] | Euler angles should be taken from <references> not common-lines file |
[frac=<num>/<denom>] | Operate only on a fraction of the raw images |
[verbose[=<n>]] | More verbose output |
[matrix] | Generates similarity matrix for entire data set in matrix.dat |
[logit=<label>] | This specifies a label to use in the particle.log file. This records particle number classification throughout a refinement. |
classesbycl start.hed proj.hed
This classifies a set of raw particles based on a set of reference projections. The output is a set of cls*.img files, one file for each reference image. This program differs from classesbymra in the use of self common-lines maps for performing the actual comparisons.