<image to align> | First input (MRC only!) |
<fixed reference> | Second input (MRC only!) |
<output> | <input 1> aligned to <input 2> |
[mrc8bit] | Output 8-bit MRC file to conserve space |
alignhuge im0221.mrc im0222.mrc
This will determine the relative alignment parameters between two very large images. It's designed for use with 'identical' images (except for defocus), ie - a focal series. It will output the aligned image and display the rotation/translation parameters.
A compile-time option exists to determine scaling differences as well as rot/trans. The program must be recompiled to enable this behavior. On JEOL microscopes, there the scaling error is below the error limit for this program.