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Comment: I could not install EMAN2 properly
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I am very much interested in trying EMAN2. However, after the installation on Linux system (eman2.nightly.linux64.tar.bz2), and modification of my .cshrc file by adding source /***/EMAN2/eman2.cshrc, it always showed "EMAN2DIR: Undefined variable.". Any suggestions to solve the problem? Thank you. Please ask your EMAN2 specific questions here. It is monitored, and one of the EMAN2 developers should post a reply. You can subscribe to any page to get an email announcement when a change is made to specific pages.

You can also check our [[http://blake.bcm.edu/bugzilla/|bug tracking system]]

'''General:'''

 * [[EMAN2/FAQ/UseEman2|Can I use EMAN2 to do refinements yet ?]]
 * [[EMAN2/FAQ/CiteEman2|What paper should I cite if I use EMAN2 for a reconstruction]]

'''Installation'''

 * [[EMAN2/FAQ/ClusterInstall|Why is EMAN2 distributed as an 'EMAN2' directory rather than Linux RPM's, etc. ?]]
 * [[EMAN2/FAQ/UseEman2_OSX|EMAN2 installed under OSX doesn't work properly. Any suggestions?]]
 * [[EMAN2/FAQ/UseEman2_Windows|EMAN2 installed under Windows doesn't work properly. Any suggestions?]]
 * [[EMAN2/FAQ/UseEman2_Ubuntu|EMAN2 installed under Ubuntu 8.04 Linux doesn't work properly. Any suggestions?]]
 * [[EMAN2/FAQ/Ubuntu_8.10_error_running_e2.py|Ubuntu 8.10 error running e2.py]]
 * [[EMAN2/FAQ/OpenSuSE_11.1|EMAN2 installed on OpenSuSE got "symbol lookup error"]]
 * More installation FAQs can be found on the [[EMAN2/Install|Installation]] page.

'''BDB Issues '''
 * [[EMAN2/FAQ/BdbErrors|I'm getting funny errors that seem to be related to BDB. What do I do ???]]
 * [[EMAN2/FAQ/BdbVstack|Can I make a vstack from another vstack, including only a subset of the images ? What will this do ?]]


'''Refinement Issues'''

 * [[EMAN2/FAQ/Symmetry|What symmetry should I use for my particle if I don't know what it is ?]]
 * [[EMAN2/FAQ/AutoMask|How do I pick the correct parameters for automasking during refinement or using the mask.auto3d processor]]
 * [[EMAN2/FAQ/ChangeBoxSize|I just decided that my box size is too large, and I want to make it smaller, how can I do this without making a mess ?]]
 * [[EMAN2/FAQ/InvertData|I just realized that I forgot to invert my data. I see black protein on a white background. What do I do ?]]

'''Program Specific FAQ'''

 * [[EMAN2/boxerFAQ|e2boxer FAQ]]
 * [[EMAN2/e2make3dfaq|e2make3d FAQ]]

'''Programming FAQ'''

 * [[EMAN2MakingVolumes|Is there a way to build a volume EMData object from a set of slices ?]]

'''EMAN2 and other software'''

 * [[EMAN2/FAQ/SpiderEuler|Can I convert EMAN2 Euler angles from e2initialmodel.py to Spider (or other) convention ?]]

Please ask your EMAN2 specific questions here. It is monitored, and one of the EMAN2 developers should post a reply. You can subscribe to any page to get an email announcement when a change is made to specific pages.

You can also check our bug tracking system

General:

Installation

BDB Issues

Refinement Issues

Program Specific FAQ

Programming FAQ

EMAN2 and other software

EMAN2/FAQ (last edited 2016-11-03 19:18:04 by SteveLudtke)