Diff for "EMAN2/FAQ"

Differences between revisions 25 and 37 (spanning 12 versions)

Please ask your EMAN2 specific questions here. It is monitored, and one of the EMAN2 developers should post a reply. You can subscribe to any page to get an email announcement when a change is made to specific pages.

You can also check our bug tracking system

General:

Installation

BDB Issues

Can I make a vstack from another vstack, including only a subset of the images ? What will this do ?

Refinement Issues

What symmetry should I use for my particle if I don't know what it is ?
How do I pick the correct parameters for automasking during refinement or using the mask.auto3d processor
I just decided that my box size is too large, and I want to make it smaller, how can I do this without making a mess ?
I just realized that I forgot to invert my data. I see black protein on a white background. What do I do ?

Program Specific FAQ

Programming FAQ

Is there a way to build a volume EMData object from a set of slices ?

EMAN2 and other software

Can I convert EMAN2 Euler angles from e2initialmodel.py to Spider (or other) convention ?

-  ⇤ ← Revision 25 as of 2009-11-05 19:32:15 → 
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  Editor: 99-12-222-199
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+   ← Revision 37 as of 2010-11-10 17:52:42 → ⇥
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  Editor: SteveLudtke
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+You can also check our [[http://blake.bcm.edu/bugzilla/|bug tracking system]]
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+ * [[EMAN2/FAQ/CiteEman2|What paper should I cite if I use EMAN2 for a reconstruction]]
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+ * [[EMAN2/FAQ/ClusterInstall|Why is EMAN2 distributed as an 'EMAN2' directory rather than Linux RPM's, etc. ?]]
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+ * [[EMAN2/FAQ/OpenSuSE_11.1|EMAN2 installed on OpenSuSE got "symbol lookup error"]]
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+'''BDB Issues '''
 * [[EMAN2/FAQ/BdbVstack|Can I make a vstack from another vstack, including only a subset of the images ?  What will this do ?]]


'''Refinement Issues'''

 * [[EMAN2/FAQ/Symmetry|What symmetry should I use for my particle if I don't know what it is ?]]
 * [[EMAN2/FAQ/AutoMask|How do I pick the correct parameters for automasking during refinement or using the mask.auto3d processor]]
 * [[EMAN2/FAQ/ChangeBoxSize|I just decided that my box size is too large, and I want to make it smaller, how can I do this without making a mess ?]]
 * [[EMAN2/FAQ/InvertData|I just realized that I forgot to invert my data. I see black protein on a white background. What do I do ?]]
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+'''Programming FAQ'''

 * [[EMAN2MakingVolumes|Is there a way to build a volume EMData object from a set of slices ?]]

'''EMAN2 and other software'''

 * [[EMAN2/FAQ/SpiderEuler|Can I convert EMAN2 Euler angles from e2initialmodel.py to Spider (or other) convention ?]]