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 * yellow - the currently selected box, for visual reference only, there are some bugs associated with this color which I have to fix...  * yellow - the currently selected box, for visual reference only, there are some bugs associated with this color which need fixing

'''Q:''' What are Dynapix and Anchor for ?

'''A:''' As of June 20th 2008 the answer is

 * Dynapix is a mode of operation where e2boxer does automatic picking in real time based on what 'references' the user adds (or deletes, or moves).
 * The presence of the anchoring options is debated - it means that a reference added is not used to refresh the correlation image - instead it is only used to refresh the automatic picking parameters. That may sound confusing - for the time being you could probably ignore it, or you could try and see what happens.

Q: The boxes around the particles can be quite colorful white, green, yellow, black; can you give me a translation to this color coding ?

A: As of June 20th 2008 the answer is

  • green - an automatically selected box
  • white - a manually specified box
  • black - a manually specified box that is being used as a reference for autoboxing
  • yellow - the currently selected box, for visual reference only, there are some bugs associated with this color which need fixing

Q: What are Dynapix and Anchor for ?

A: As of June 20th 2008 the answer is

  • Dynapix is a mode of operation where e2boxer does automatic picking in real time based on what 'references' the user adds (or deletes, or moves).
  • The presence of the anchoring options is debated - it means that a reference added is not used to refresh the correlation image - instead it is only used to refresh the automatic picking parameters. That may sound confusing - for the time being you could probably ignore it, or you could try and see what happens.

EMAN2/boxerFAQ (last edited 2009-03-13 02:56:14 by DavidWoolford)