Results 26 - 50 of 109 results out of about 4270 pages. (1.69 seconds)
- EMAN2/ProgramFiles . . . 19 matches
- ...= EMAN2 Output Files =
This page documents all of the various files produced by various tasks and workflows in EMAN2. While the format of the actual files will
be one of the stan...
- Eman2CProgQuickstart . . . 18 matches
- ... * [[http://blake.bcm.edu/eman2/coding_style.html|What is the EMAN2's coding style?]]
* [[http://blake.bcm.edu/eman2/adding_processor.html|How to add a new processor in EMAN2?]]
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- EMAN2/Hdf5Format . . . 18 matches
- ...mat adopted by numerous scientific disciplines. In the CryoEM community, it is used by EMAN2/SPARX/SPHIRE, Chimera (2 different variants), and may(?) have some support in recent I...
- Eman2CprogQuickStart . . . 16 matches
- ... * [[http://blake.bcm.edu/eman2/coding_style.html|What is the EMAN2's coding style?]]
* [[http://blake.bcm.edu/eman2/adding_processor.html|How to add a new processor in EMAN2?]]
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- Eman2CprogQuicjStart . . . 16 matches
- ... * [[http://blake.bcm.edu/eman2/coding_style.html|What is the EMAN2's coding style?]]
* [[http://blake.bcm.edu/eman2/adding_processor.html|How to add a new processor in EMAN2?]]
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- Eman2CProgQuickStart . . . 16 matches
- ... * [[http://blake.bcm.edu/eman2/coding_style.html|What is the EMAN2's coding style?]]
* [[http://blake.bcm.edu/eman2/adding_processor.html|How to add a new processor in EMAN2?]]
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- EMAN2DevFAQ . . . 16 matches
- ... * [[http://blake.bcm.edu/eman2/coding_style.html|What is the EMAN2's coding style?]]
* [[http://blake.bcm.edu/eman2/adding_processor.html|How to add a new processor in EMAN2?]]
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- EMAN2/Install/BinaryInstallAnaconda . . . 16 matches
- ...are in reverse chronological order. The [[https://cryoem.bcm.edu/cryoem/downloads/view_eman2_version/25|Continuous Build]] is rebuilt daily and any time a developer makes a change...
- EMAN2/ChangeLog . . . 15 matches
- ...uggest subscribing to or searching the [[https://groups.google.com/forum/?hl=en#!forum/eman2|Google Group]] when you have questions. We have resumed updating the ChangeLog here as...
- EMAN2/AdvancedTutorials . . . 14 matches
- ...== AdvancedTutorials ==
=== Archive of weekly EMAN2/Python discussion session ===
Once a week we hold an informal discussion session covering some topic related to using EMAN2 fr...
- EMAN2/TransformConventions . . . 13 matches
- ...= This page is DEPRECATED =
Please refer to [[Eman2TransformInPython|using the Transform object in python/EMAN2]] for the latest. In fact this page should probably not exist
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- Eman2NFS . . . 12 matches
- ...= This page is obsolete =
== Using EMAN2 with shared filesystems (like NFS) ==
In many large groups, computers will be configured so users can login to multiple machines, and th...
- EMAN2/Programs/tomoseg . . . 12 matches
- ...== Tomogram Annotation/Segmentation ==
Availability: EMAN2.2+, or daily build after 2016-10
This is the tutorial for a Convolutional neural network(CNN) based semi-automated cell...
- EMAN2/Eman1Transition . . . 12 matches
- ...= Moving from EMAN1 to EMAN2 =
== A choice of paths ==
EMAN2 can be used in many different ways:
* A high-level integrated workflow interface
* Stand-alone GUI tools (like EM...
- EMAN2/Programs/emselector . . . 11 matches
- ...| [[e2display|Display Basics]] | [[EMAN2/Programs/emselector|EMAN2 File Browser]] | [[EMAN2/Programs/emimage2d|2D Display]] | [[EMAN2/Programs/emimagemx|2D Stack Display]] | [[EM...
- EMAN2/FAQ/BdbErrors . . . 11 matches
- ...== BDB Troubleshooting ==
'''Please note that the BDB system is no longer used in EMAN2.1, and may not even be supported in EMAN2.2. We STRONGLY encourage all users to upgrade to...
- EMAN2/FAQ/BdbConvert . . . 11 matches
- ...ra will open it, and it preserves the full model
metadata, which MRC cannot. Of course EMAN2 supports most other file formats (see: [[Eman2DataStorage]] [[EMAN2ImageFormats]]) as ...
- EMAN2/Eman1Transition/QuickStart . . . 11 matches
- ...== Porting an EMAN1 refinement project to EMAN2.3 ==
''Note : This page contains a simplified version of the EMAN2.1 tutorial, and assumes you are familiar with EMAN1. The full [...
- Eman2ProgQuickstart . . . 10 matches
- ...=== EMAN2 Programming Quickstart ===
This page contains some example sessions to get you started using EMAN2 from Python. This is not aimed at mainstream users, but is for those w...
- EMAN2/Programs/emimagemx . . . 10 matches
- ...| [[e2display|Display Basics]] | [[EMAN2/Programs/emselector|EMAN2 File Browser]] | [[EMAN2/Programs/emimage2d|2D Display]] | [[EMAN2/Programs/emimagemx|2D Stack Display]] | [[EM...
- EMAN2/Programs/e2refinetorelion3d/e2refinetorelion3dtutorial . . . 10 matches
- ...Notes:
*The main documentation for ''e2refinetorelion3d.py'' can be found [[EMAN2/Programs/e2refinetorelion3d|here]]
*This tutorial is designed with the assumption that the use...
- EMAN2/Parallel/Distributed . . . 10 matches
- ...'''''THIS METHOD IS NO LONGER WORKING IN EMAN2.1''''' - we are considering retiring it. It was quite powerful and useful many years ago, but rarely makes sense in the current linu...
- EMAN2/Parallel/BuildMpi . . . 10 matches
- ... many variants of MPI, and different users may
need different versions. In the case of EMAN2, OpenMPI, the most widely used MPI distribution, works well in almost all situations, ...
- EMAN2/Parallel . . . 10 matches
- ...== Parallel Processing in EMAN2 ==
EMAN2 uses a modular strategy for running commands in parallel. That is, you can choose different ways to run EMAN2 programs in parallel, depen...
- EMAN2/CtfModel . . . 10 matches
- ...== The CTF Model(s) used in EMAN2 ==
This page describes CTF correction from a programmer's perspective. There is a [[EMAN2/Theory/CTF|theory page]] describing the theoretical
un...