<classes> | File with class averages |
<3d model> | Preliminary 3d model to clean up |
[sym=<sym>] | Symmetry specification |
[proc=<nproc>] | Number of processors to use |
[3dit=<n iter>] | Number of 'normal' cleaning iterations |
[3dit2=<n iter>] | Number of 'zeroing' cleaning iterations |
clean3d classes.5.img threed.5a.img sym=d7 3dit=2 3dit2=2
This program performs iterative real-space refinement to make a 3D model more closely match a set of class-averages. There are 2 versions of the routine. The '3dit=' routine simply tries for the 'median' match. The '3dit2=' routine drives the densities to zero as much as is permitted by the class averages.