<input file> | Source file |
<output file> | Destination file |
<n seg> | Number of segments to split map into |
[ampw] | Apply a straight line integral amplitude weight to the distance parameter |
[thr=<val>] | Only segment voxels above the given threshold |
[split] | Separate out the individual segments |
[maxit=<n>] | Specify maximum iterations before giving up on convergence |
[itxp=<n>] | After the segmentation, iteratively extend the segments into regions below threshold, n is the number of voxels of expansion |
[gaussmod=<mrc out>] | Construct a 3d model from Gaussians centered at the group centers. |
[randomize] | This will randomize the gaussians by rotating them randomly with a fixed radius |
segment3d threed.1a.mrc seg.mrc 12 thr=1
This program will take a 3D map and attempt to intelligently split that map into 'segments'.
That is, every voxel in the map will be assigned to one of
EMAN Manual page, generated Mon Apr 15 09:05:17 2002