Table 4.14:
e2tomogram.py Options
| Argument |
Description |
| |
|
| -version |
show program's version number and exit |
| -h, -help |
show this help message and exit |
| -T |
TILT, -tilt=TILT Angular spacing between tilts (fixed) |
| -M |
MAXSHIFT, -maxshift=MAXSHIFT Maximum translational error between images (pixels), default=64 |
| -B |
BOX, -box=BOX Box size for alignment probe (pixels), default=96 |
| -highpass=HIGHPASS |
Highpass Gaussian processor radius (pixels), default none |
| -lowpass=LOWPASS |
Lowpass Gaussian processor radius (pixels), default none |
| -mode=MODE |
centering mode 'modeshift', 'censym' or 'region, x , y , clipsize , alisize |
| -localavg=LOCALAVG |
Average several images for the alignment |
| -tiltaxis=TILTAXIS |
Skip automatic tilt axis location, use fixed angle from x |
| -twopass |
Skip automatic tilt axis location, use fixed angle from x |
| -nozero |
Do not allow 0-translations between images |
| |
|