#include <processor.h>
Inheritance diagram for EMAN::IndexMaskFileProcessor:


Public Member Functions | |
| virtual void | process_inplace (EMData *image) |
| To process an image in-place. | |
| virtual string | get_name () const |
| Get the processor's name. | |
| virtual TypeDict | get_param_types () const |
| Get processor parameter information in a dictionary. | |
| virtual string | get_desc () const |
| Get the descrition of this specific processor. | |
Static Public Member Functions | |
| Processor * | NEW () |
Static Public Attributes | |
| const string | NAME = "mask.fromfile" |
The images must be same size. If 'ismaskset=' is 1, it will take a file containing a set of masks and apply the first mask to the image.
| filename | mask image file name | |
| ismaskset | If set to 1, it will take a file containing a set of masks and apply the first mask to the image |
Definition at line 5304 of file processor.h.
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Get the descrition of this specific processor. This function must be overwritten by a subclass.
Implements EMAN::Processor. Definition at line 5327 of file processor.h. 05328 {
05329 return "Multiplies the image by the specified file using pixel indices. The images must be same size. If 'ismaskset=' is 1, it will take a file containing a set of masks and apply the first mask to the image.";
05330 }
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Get the processor's name. Each processor is identified by a unique name.
Implements EMAN::Processor. Definition at line 5309 of file processor.h. 05310 {
05311 return NAME;
05312 }
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Get processor parameter information in a dictionary. Each parameter has one record in the dictionary. Each record contains its name, data-type, and description.
Reimplemented from EMAN::Processor. Definition at line 5319 of file processor.h. References EMAN::TypeDict::put(). 05320 {
05321 TypeDict d;
05322 d.put("filename", EMObject::STRING, "mask image file name");
05323 d.put("ismaskset", EMObject::INT, "If set to 1, it will take a file containing a set of masks and apply the first mask to the image");
05324 return d;
05325 }
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Definition at line 5314 of file processor.h. 05315 {
05316 return new IndexMaskFileProcessor();
05317 }
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To process an image in-place. For those processors which can only be processed out-of-place, override this function to just print out some error message to remind user call the out-of-place version.
Implements EMAN::Processor. Definition at line 5994 of file processor.cpp. References EMAN::EMUtil::is_same_size(), LOGERR, LOGWARN, EMAN::EMData::mult(), EMAN::EMData::process_inplace(), and EMAN::EMData::read_image(). 05995 {
05996 if (!image) {
05997 LOGWARN("NULL Image");
05998 return;
05999 }
06000
06001 const char *filename = params["filename"];
06002 EMData *msk = new EMData();
06003 msk->read_image(filename);
06004 if (!EMUtil::is_same_size(image, msk)) {
06005 LOGERR("IndexMaskFileProcessor: Mask size different than image");
06006 return;
06007 }
06008
06009 if ((int) params["ismaskset"] != 0) {
06010 msk->process_inplace("threshold.binaryrange", Dict("low", 0.5f, "high", 1.5f));
06011 }
06012
06013 image->mult(*msk);
06014 if( msk )
06015 {
06016 delete msk;
06017 msk = 0;
06018 }
06019 }
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Definition at line 183 of file processor.cpp. |
1.3.9.1