#include <processor.h>
Inheritance diagram for EMAN::IndexMaskFileProcessor:
Public Member Functions | |
virtual void | process_inplace (EMData *image) |
To process an image in-place. | |
virtual string | get_name () const |
Get the processor's name. | |
virtual TypeDict | get_param_types () const |
Get processor parameter information in a dictionary. | |
virtual string | get_desc () const |
Get the descrition of this specific processor. | |
Static Public Member Functions | |
Processor * | NEW () |
Static Public Attributes | |
const string | NAME = "mask.fromfile" |
The images must be same size. If 'ismaskset=' is 1, it will take a file containing a set of masks and apply the first mask to the image.
filename | mask image file name | |
ismaskset | If set to 1, it will take a file containing a set of masks and apply the first mask to the image |
Definition at line 5380 of file processor.h.
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Get the descrition of this specific processor. This function must be overwritten by a subclass.
Implements EMAN::Processor. Definition at line 5403 of file processor.h. 05404 { 05405 return "Multiplies the image by the specified file using pixel indices. The images must be same size. If 'ismaskset=' is 1, it will take a file containing a set of masks and apply the first mask to the image."; 05406 }
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Get the processor's name. Each processor is identified by a unique name.
Implements EMAN::Processor. Definition at line 5385 of file processor.h. 05386 {
05387 return NAME;
05388 }
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Get processor parameter information in a dictionary. Each parameter has one record in the dictionary. Each record contains its name, data-type, and description.
Reimplemented from EMAN::Processor. Definition at line 5395 of file processor.h. References EMAN::TypeDict::put(). 05396 { 05397 TypeDict d; 05398 d.put("filename", EMObject::STRING, "mask image file name"); 05399 d.put("ismaskset", EMObject::INT, "If set to 1, it will take a file containing a set of masks and apply the first mask to the image"); 05400 return d; 05401 }
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Definition at line 5390 of file processor.h. 05391 { 05392 return new IndexMaskFileProcessor(); 05393 }
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To process an image in-place. For those processors which can only be processed out-of-place, override this function to just print out some error message to remind user call the out-of-place version.
Implements EMAN::Processor. Definition at line 6152 of file processor.cpp. References EMAN::EMUtil::is_same_size(), LOGERR, LOGWARN, EMAN::EMData::mult(), EMAN::EMData::process_inplace(), and EMAN::EMData::read_image(). 06153 { 06154 if (!image) { 06155 LOGWARN("NULL Image"); 06156 return; 06157 } 06158 06159 const char *filename = params["filename"]; 06160 EMData *msk = new EMData(); 06161 msk->read_image(filename); 06162 if (!EMUtil::is_same_size(image, msk)) { 06163 LOGERR("IndexMaskFileProcessor: Mask size different than image"); 06164 return; 06165 } 06166 06167 if ((int) params["ismaskset"] != 0) { 06168 msk->process_inplace("threshold.binaryrange", Dict("low", 0.5f, "high", 1.5f)); 06169 } 06170 06171 image->mult(*msk); 06172 if( msk ) 06173 { 06174 delete msk; 06175 msk = 0; 06176 } 06177 }
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Definition at line 178 of file processor.cpp. |