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EMAN::ACFCenterProcessor Class Reference
[unit test in Python]

Center image using auto convolution with 180 degree rotation. More...

#include <processor.h>

Inheritance diagram for EMAN::ACFCenterProcessor:

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Collaboration diagram for EMAN::ACFCenterProcessor:

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List of all members.

Public Member Functions

virtual void process_inplace (EMData *image)
 To process an image in-place.
virtual string get_name () const
 Get the processor's name.
virtual string get_desc () const
 Get the descrition of this specific processor.
virtual TypeDict get_param_types () const
 Get processor parameter information in a dictionary.

Static Public Member Functions

ProcessorNEW ()

Static Public Attributes

const string NAME = "xform.centeracf"

Detailed Description

Center image using auto convolution with 180 degree rotation.

Definition at line 5201 of file processor.h.


Member Function Documentation

virtual string EMAN::ACFCenterProcessor::get_desc  )  const [inline, virtual]
 

Get the descrition of this specific processor.

This function must be overwritten by a subclass.

Returns:
The description of this processor.

Implements EMAN::Processor.

Definition at line 5216 of file processor.h.

05217                 {
05218                         return "Center image using self-convolution.";
05219                 }

virtual string EMAN::ACFCenterProcessor::get_name  )  const [inline, virtual]
 

Get the processor's name.

Each processor is identified by a unique name.

Returns:
The processor's name.

Implements EMAN::Processor.

Definition at line 5206 of file processor.h.

05207                 {
05208                         return NAME;
05209                 }

virtual TypeDict EMAN::ACFCenterProcessor::get_param_types  )  const [inline, virtual]
 

Get processor parameter information in a dictionary.

Each parameter has one record in the dictionary. Each record contains its name, data-type, and description.

Returns:
A dictionary containing the parameter info.

Reimplemented from EMAN::Processor.

Definition at line 5221 of file processor.h.

05222                 {
05223                         TypeDict d;
05224                         return d;
05225                 }

Processor* EMAN::ACFCenterProcessor::NEW  )  [inline, static]
 

Definition at line 5211 of file processor.h.

05212                 {
05213                         return new ACFCenterProcessor();
05214                 }

void ACFCenterProcessor::process_inplace EMData image  )  [virtual]
 

To process an image in-place.

For those processors which can only be processed out-of-place, override this function to just print out some error message to remind user call the out-of-place version.

Parameters:
image The image to be processed.

Implements EMAN::Processor.

Definition at line 5832 of file processor.cpp.

References EMAN::EMData::align(), EMAN::EMData::get_attr(), EMAN::EMData::get_ndim(), EMAN::Transform::get_trans(), EMAN::EMData::get_xsize(), LOGWARN, EMAN::EMData::set_attr(), t, and EMAN::EMData::translate().

05833 {
05834         if (!image) {
05835                 LOGWARN("NULL Image");
05836                 return;
05837         }
05838 
05839         Dict params1;
05840         params1["intonly"] = 1;
05841         params1["maxshift"] = image->get_xsize() / 4;
05842         EMData* aligned = image->align("translational", 0, params1);
05843         if ( image->get_ndim() == 3 ) {
05844                 Transform* t = aligned->get_attr("xform.align3d");
05845                 image->translate(t->get_trans());
05846                 image->set_attr("xform.align3d",t);
05847                 delete t;
05848         }
05849         else {
05850                 // assumption is the image is 2D which may be  false
05851                 Transform* t = aligned->get_attr("xform.align2d");
05852                 image->translate(t->get_trans());
05853                 image->set_attr("xform.align2d",t);
05854                 delete t;
05855         }
05856 
05857         delete aligned;
05858 
05859 }


Member Data Documentation

const string ACFCenterProcessor::NAME = "xform.centeracf" [static]
 

Definition at line 173 of file processor.cpp.


The documentation for this class was generated from the following files:
Generated on Mon Aug 13 13:42:21 2012 for EMAN2 by  doxygen 1.3.9.1