absi() const | EMAN::EMData | |
add(float f, int keepzero=0) | EMAN::EMData | |
add(const EMData &image) | EMAN::EMData | |
add_complex_at(const int &x, const int &y, const int &z, const std::complex< float > &val) | EMAN::EMData | |
add_complex_at(int x, int y, int z, const int &subx0, const int &suby0, const int &subz0, const int &fullnx, const int &fullny, const int &fullnz, const std::complex< float > &val) | EMAN::EMData | |
add_complex_at_fast(const int &x, const int &y, const int &z, const std::complex< float > &val) | EMAN::EMData | [inline] |
add_incoherent(EMData *obj) | EMAN::EMData | |
addsquare(const EMData &image) | EMAN::EMData | |
align(const string &aligner_name, EMData *to_img, const Dict ¶ms=Dict(), const string &cmp_name="", const Dict &cmp_params=Dict()) | EMAN::EMData | |
all_translation | EMAN::EMData | [private] |
amplitude() const | EMAN::EMData | |
ap2ri() | EMAN::EMData | |
append_image(const string &filename, EMUtil::ImageType imgtype=EMUtil::IMAGE_UNKNOWN, bool header_only=false) | EMAN::EMData | |
apply_radial_func(float x0, float dx, vector< float >array, bool interp=true) | EMAN::EMData | |
attr_dict | EMAN::EMData | [mutable, private] |
average_circ_sub() const | EMAN::EMData | |
backproject(const string &projector_name, const Dict ¶ms=Dict()) | EMAN::EMData | |
bispecRotTransInvDirect(int type=0) | EMAN::EMData | |
bispecRotTransInvN(int N, int NK) | EMAN::EMData | |
calc_az_dist(int n, float a0, float da, float rmin, float rmax) | EMAN::EMData | |
calc_ccf(EMData *with=0, fp_flag fpflag=CIRCULANT, bool center=false) | EMAN::EMData | |
calc_ccfx(EMData *const with, int y0=0, int y1=-1, bool nosum=false, bool flip=false, bool usez=false) | EMAN::EMData | |
calc_center_density() | EMAN::EMData | |
calc_center_of_mass(const float threshold=0) | EMAN::EMData | |
calc_dist(EMData *second_img, int y_index=0) const | EMAN::EMData | |
calc_fast_sigma_image(EMData *mask) | EMAN::EMData | |
calc_flcf(EMData *with) | EMAN::EMData | |
calc_fourier_shell_correlation(EMData *with, float w=1.0f) | EMAN::EMData | |
calc_highest_locations(float threshold) const | EMAN::EMData | |
calc_hist(int hist_size=128, float hist_min=0, float hist_max=0, const float &brt=0.0f, const float &cont=1.0f) | EMAN::EMData | |
calc_max_index() const | EMAN::EMData | |
calc_max_location() const | EMAN::EMData | |
calc_max_location_wrap(const int maxshiftx=-1, const int maxshifty=-1, const int maxshiftz=-1) | EMAN::EMData | |
calc_max_location_wrap_intp(const int maxshiftx=-1, const int maxshifty=-1, const int maxshiftz=-1) | EMAN::EMData | |
calc_min_index() const | EMAN::EMData | |
calc_min_location() const | EMAN::EMData | |
calc_mutual_correlation(EMData *with, bool tocorner=false, EMData *filter=0) | EMAN::EMData | |
calc_n_highest_locations(int n) | EMAN::EMData | |
calc_radial_dist(int n, float x0, float dx, bool inten) | EMAN::EMData | |
calc_radial_dist(int n, float x0, float dx, int nwedge, float offset, bool inten) | EMAN::EMData | |
calc_sigma_diff() | EMAN::EMData | |
cconj() | EMAN::EMData | |
center_origin() | EMAN::EMData | |
center_origin_fft() | EMAN::EMData | |
center_origin_yz() | EMAN::EMData | |
changecount | EMAN::EMData | [private] |
clearupdate() | EMAN::EMData | [inline] |
clip_inplace(const Region &area, const float &fill_value=0) | EMAN::EMData | |
cm_euc(EMData *sinoj, int n1, int n2) | EMAN::EMData | |
cmp(const string &cmpname, EMData *with, const Dict ¶ms=Dict()) | EMAN::EMData | |
cmplx(const int ix, const int iy, const int iz) | EMAN::EMData | [inline] |
cmplx(const int ix, const int iy) | EMAN::EMData | [inline] |
cmplx(const int ix) | EMAN::EMData | [inline] |
cog() | EMAN::EMData | |
common_lines(EMData *image1, EMData *image2, int mode=0, int steps=180, bool horizontal=false) | EMAN::EMData | |
common_lines_real(EMData *image1, EMData *image2, int steps=180, bool horizontal=false) | EMAN::EMData | |
compute_missingwedge(float wedgeangle, float start=0.05, float stop=0.5) | EMAN::EMData | |
conjg() | EMAN::EMData | |
convolute(EMData *with) | EMAN::EMData | |
copy() const | EMAN::EMData | |
copy_empty_head() const | EMAN::EMData | |
copy_head() const | EMAN::EMData | |
cut_slice(const EMData *const map, const Transform &tr, bool interpolate=true) | EMAN::EMData | |
debug_print_parms() | EMAN::EMData | [inline] |
del_attr(const string &attr_name) | EMAN::EMData | |
del_attr_dict(const vector< string > &del_keys) | EMAN::EMData | |
delete_disconnected_regions(int ix=0, int iy=0, int iz=0) | EMAN::EMData | |
depad() | EMAN::EMData | |
depad_corner() | EMAN::EMData | |
div(float f) | EMAN::EMData | |
div(const EMData &image) | EMAN::EMData | |
divkbsinh(const Util::KaiserBessel &kb) | EMAN::EMData | |
divkbsinh_rect(const Util::KaiserBessel &kbx, const Util::KaiserBessel &kby, const Util::KaiserBessel &kbz) | EMAN::EMData | |
do_fft() const | EMAN::EMData | |
do_fft_inplace() | EMAN::EMData | |
do_ift() | EMAN::EMData | |
do_ift_inplace() | EMAN::EMData | |
do_radon() | EMAN::EMData | |
dot(EMData *with) | EMAN::EMData | |
dot_rotate_translate(EMData *with, float dx, float dy, float da, const bool mirror=false) | EMAN::EMData | |
downsample(Util::sincBlackman &kb, float scale=1.0) | EMAN::EMData | |
EMData() | EMAN::EMData | |
EMData(const string &filename, int image_index=0) | EMAN::EMData | [explicit] |
EMData(int nx, int ny, int nz=1, bool is_real=true) | EMAN::EMData | |
EMData(float *data, const int nx, const int ny, const int nz, const Dict &attr_dict=Dict()) | EMAN::EMData | |
EMData(float *data, float *cudadata, const int nx, const int ny, const int nz, const Dict &attr_dict=Dict()) | EMAN::EMData | |
EMData(const EMData &that) | EMAN::EMData | |
EMDATA_BUSY enum value | EMAN::EMData | [private] |
EMDATA_CPU_NEEDS_UPDATE enum value | EMAN::EMData | [private] |
EMDATA_FFTODD enum value | EMAN::EMData | [private] |
EMDATA_FH enum value | EMAN::EMData | [private] |
EMDATA_FLIP enum value | EMAN::EMData | [private] |
EMDATA_GPU_NEEDS_UPDATE enum value | EMAN::EMData | [private] |
EMDATA_GPU_RO_NEEDS_UPDATE enum value | EMAN::EMData | [private] |
EMDATA_HASCTFF enum value | EMAN::EMData | [private] |
EMDATA_NEEDUPD enum value | EMAN::EMData | [private] |
EMDATA_PAD enum value | EMAN::EMData | [private] |
EMDATA_SHUFFLE enum value | EMAN::EMData | [private] |
EMDataFlags enum name | EMAN::EMData | [private] |
equal(const EMData &that) const | EMAN::EMData | |
extract_box(const Transform &cs, const Region &r) | EMAN::EMData | |
extract_plane(const Transform &tf, Util::KaiserBessel &kb) | EMAN::EMData | |
extract_plane_rect(const Transform &tf, Util::KaiserBessel &kbx, Util::KaiserBessel &kby, Util::KaiserBessel &kbz) | EMAN::EMData | |
extract_plane_rect_fast(const Transform &tf, Util::KaiserBessel &kbx, Util::KaiserBessel &kby, Util::KaiserBessel &kbz) | EMAN::EMData | |
extractline(Util::KaiserBessel &kb, float nuxnew, float nuynew) | EMAN::EMData | |
extractpoint(float xin, float yin, Util::KaiserBessel &kb) | EMAN::EMData | |
FFT_IN_PLACE enum value | EMAN::EMData | |
FFT_OUT_OF_PLACE enum value | EMAN::EMData | |
fft_shuffle() | EMAN::EMData | |
FFTPLACE enum name | EMAN::EMData | |
FH2F(int Size, float OverSamplekB, int IntensityFlag=0) | EMAN::EMData | |
FH2Real(int Size, float OverSamplekB, int IntensityFlag=0) | EMAN::EMData | |
filter_by_image(EMData *image, bool RetReal=true) | EMAN::EMData | |
find_3d_threshold(float mass, float pixel_size) | EMAN::EMData | |
find_pixels_with_value(float val) | EMAN::EMData | |
flags | EMAN::EMData | [mutable, private] |
Four_ds(int nxni, int nyni=0, int nzni=0, bool RetReal=true) | EMAN::EMData | |
Four_shuf_ds_cen_us(int nxni, int nyni=0, int nzni=0, bool RetReal=true) | EMAN::EMData | |
fouriergridrot2d(float ang, float scale, Util::KaiserBessel &kb) | EMAN::EMData | |
fouriergridrot_shift2d(float ang, float sx, float sy, Util::KaiserBessel &kb) | EMAN::EMData | |
FourInterpol(int nxni, int nyni=0, int nzni=0, bool RetReal=true) | EMAN::EMData | |
FourTruncate(int nxni, int nyni=0, int nzni=0, bool RetReal=true) | EMAN::EMData | |
free_memory() | EMAN::EMData | |
free_rdata() | EMAN::EMData | |
get_2dcview() const | EMAN::EMData | |
get_2dcview(int x0, int y0) const | EMAN::EMData | |
get_2dview() const | EMAN::EMData | |
get_2dview(int x0, int y0) const | EMAN::EMData | |
get_3dcview() const | EMAN::EMData | |
get_3dcview(int x0, int y0, int z0) const | EMAN::EMData | |
get_3dcviewptr() const | EMAN::EMData | |
get_3dview() const | EMAN::EMData | |
get_3dview(int x0, int y0, int z0) const | EMAN::EMData | |
get_amplitude_thres(float thres) | EMAN::EMData | |
get_array_offsets() | EMAN::EMData | [inline] |
get_attr(const string &attr_name) const | EMAN::EMData | |
get_attr_default(const string &attr_name, const EMObject &em_obj=EMObject()) const | EMAN::EMData | |
get_attr_dict() const | EMAN::EMData | |
get_changecount() const | EMAN::EMData | [inline] |
get_circle_mean() | EMAN::EMData | |
get_clip(const Region &area, const float fill=0) const | EMAN::EMData | |
get_col(int col_index) const | EMAN::EMData | |
get_complex_at(const int &x, const int &y) const | EMAN::EMData | |
get_complex_at(const int &x, const int &y, const int &z) const | EMAN::EMData | |
get_complex_index(const int &x, const int &y, const int &z) const | EMAN::EMData | |
get_complex_index(int x, int y, int z, const int &subx0, const int &suby0, const int &subz0, const int &fullnx, const int &fullny, const int &fullnz) const | EMAN::EMData | |
get_complex_index_fast(const int &x, const int &y, const int &z) const | EMAN::EMData | [inline] |
get_const_data() const | EMAN::EMData | [inline] |
get_ctf() const | EMAN::EMData | |
get_data() const | EMAN::EMData | [inline] |
get_data_as_vector() const | EMAN::EMData | [inline] |
get_data_pickle() const | EMAN::EMData | |
get_edge_mean() const | EMAN::EMData | |
get_fft_amplitude() | EMAN::EMData | |
get_fft_amplitude2D() | EMAN::EMData | |
get_fft_phase() | EMAN::EMData | |
get_flags() const | EMAN::EMData | [inline] |
get_ndim() const | EMAN::EMData | [inline] |
get_path() const | EMAN::EMData | [inline] |
get_pathnum() const | EMAN::EMData | [inline] |
get_pixel_conv(float delx, float dely, float delz, Util::KaiserBessel &kb) | EMAN::EMData | |
get_pixel_conv7(float delx, float dely, float delz, Util::KaiserBessel &kb) | EMAN::EMData | |
get_pixel_filtered(float delx, float dely, float delz, Util::sincBlackman &kb) | EMAN::EMData | |
get_pow(float n_pow) | EMAN::EMData | |
get_rotated_clip(const Transform &xform, const IntSize &size, float scale=1.0) | EMAN::EMData | |
get_row(int row_index) const | EMAN::EMData | |
get_size() const | EMAN::EMData | [inline] |
get_supp_pickle() const | EMAN::EMData | |
get_top_half() const | EMAN::EMData | |
get_transform() const | EMAN::EMData | [inline] |
get_translation() const | EMAN::EMData | [inline] |
get_value_at(int x, int y, int z) const | EMAN::EMData | [inline] |
get_value_at(int x, int y) const | EMAN::EMData | [inline] |
get_value_at(size_t i) const | EMAN::EMData | [inline] |
get_value_at_index(int i) | EMAN::EMData | [inline] |
get_value_at_wrap(int x, int y, int z) const | EMAN::EMData | |
get_value_at_wrap(int x, int y, int z) | EMAN::EMData | |
get_value_at_wrap(int x, int y) const | EMAN::EMData | |
get_value_at_wrap(int x, int y) | EMAN::EMData | |
get_value_at_wrap(int x) const | EMAN::EMData | |
get_value_at_wrap(int x) | EMAN::EMData | |
get_xoff() const | EMAN::EMData | [inline] |
get_xsize() const | EMAN::EMData | [inline] |
get_yoff() const | EMAN::EMData | [inline] |
get_ysize() const | EMAN::EMData | [inline] |
get_zoff() const | EMAN::EMData | [inline] |
get_zsize() const | EMAN::EMData | [inline] |
getconvpt2d_kbi0(float x, float y, Util::KaiserBessel::kbi0_win win, int size=7) | EMAN::EMData | |
getResolution() const | EMAN::EMData | [inline] |
GLUtil class | EMAN::EMData | [friend] |
has_attr(const string &key) const | EMAN::EMData | [inline] |
has_ctff() const | EMAN::EMData | [inline] |
helicise(float pixel_size, float dp, float dphi, float section_use=1.0f, float radius=-1.0f, float minrad=-1.0f) | EMAN::EMData | |
helicise_grid(float pixel_size, float dp, float dphi, Util::KaiserBessel &kb, float section_use=1.0f, float radius=-1.0f, float minrad=-1.0f) | EMAN::EMData | |
imag() const | EMAN::EMData | |
insert_clip(const EMData *const block, const IntPoint &origin) | EMAN::EMData | |
insert_rect_slice(EMData *w, EMData *myfft, const Transform &trans, int sizeofprojection, float xratio, float yratio, float zratio, int npad, int mult) | EMAN::EMData | |
insert_rect_slice_ctf(EMData *w, EMData *myfft, const Transform &trans, int sizeofprojection, float xratio, float yratio, float zratio, int npad, int mult) | EMAN::EMData | |
insert_rect_slice_ctf_applied(EMData *w, EMData *myfft, const Transform &trans, int sizeofprojection, float xratio, float yratio, float zratio, int npad, int mult) | EMAN::EMData | |
insert_scaled_sum(EMData *block, const FloatPoint ¢er, float scale=1.0, float mult_factor=1.0) | EMAN::EMData | |
is_complex() const | EMAN::EMData | [inline] |
is_complex_x() const | EMAN::EMData | [inline] |
is_fftodd() const | EMAN::EMData | [inline] |
is_fftpadded() const | EMAN::EMData | [inline] |
is_FH() const | EMAN::EMData | [inline] |
is_flipped() const | EMAN::EMData | [inline] |
is_real() const | EMAN::EMData | [inline] |
is_ri() const | EMAN::EMData | [inline] |
is_shuffled() const | EMAN::EMData | [inline] |
little_big_dot(EMData *little_img, bool do_sigma=false) | EMAN::EMData | |
log() const | EMAN::EMData | |
log10() const | EMAN::EMData | |
make_footprint(int type=0) | EMAN::EMData | |
make_rotational_footprint(bool unwrap=true) | EMAN::EMData | |
make_rotational_footprint_cmc(bool unwrap=true) | EMAN::EMData | |
make_rotational_footprint_e1(bool unwrap=true) | EMAN::EMData | |
mask_contig_region(const float &val, const Vec3i &seed) | EMAN::EMData | |
max_3D_pixel_error(const Transform &t1, const Transform &t2, float r) | EMAN::EMData | |
mult(int n) | EMAN::EMData | [inline] |
mult(float f) | EMAN::EMData | |
mult(const EMData &image, bool prevent_complex_multiplication=false) | EMAN::EMData | |
mult_complex_efficient(const EMData &em, const int radius) | EMAN::EMData | |
mult_radial(EMData *radial) | EMAN::EMData | |
nn(EMData *wptr, EMData *myfft, const Transform &tf, int mult=1) | EMAN::EMData | |
nn_ctf(EMData *w, EMData *myfft, const Transform &tf, int mult) | EMAN::EMData | |
nn_ctf_applied(EMData *w, EMData *myfft, const Transform &tf, int mult) | EMAN::EMData | |
nn_SSNR(EMData *wptr, EMData *wptr2, EMData *myfft, const Transform &tf, int mult=1) | EMAN::EMData | |
nn_SSNR_ctf(EMData *wptr, EMData *wptr2, EMData *wptr3, EMData *myfft, const Transform &tf, int mult=1) | EMAN::EMData | |
norm_pad(bool do_norm, int npad=1, int valtype=0) | EMAN::EMData | |
nx | EMAN::EMData | [private] |
nxy | EMAN::EMData | [private] |
nxyz | EMAN::EMData | [private] |
ny | EMAN::EMData | [private] |
nz | EMAN::EMData | [private] |
oneDfftPolar(int size, float rmax, float MAXR) | EMAN::EMData | |
onelinenn(int j, int n, int n2, EMData *wptr, EMData *bi, const Transform &tf) | EMAN::EMData | |
onelinenn_ctf(int j, int n, int n2, EMData *w, EMData *bi, const Transform &tf, int mult) | EMAN::EMData | |
onelinenn_ctf_applied(int j, int n, int n2, EMData *w, EMData *bi, const Transform &tf, int mult) | EMAN::EMData | |
onelinenn_mult(int j, int n, int n2, EMData *wptr, EMData *bi, const Transform &tf, int mult) | EMAN::EMData | |
operator *=(float n) | EMAN::EMData | |
operator *=(const EMData &em) | EMAN::EMData | |
operator()(const int ix, const int iy, const int iz) const | EMAN::EMData | [inline] |
operator()(const int ix, const int iy) const | EMAN::EMData | [inline] |
operator()(const size_t ix) const | EMAN::EMData | [inline] |
operator+=(float n) | EMAN::EMData | |
operator+=(const EMData &em) | EMAN::EMData | |
operator-=(float n) | EMAN::EMData | |
operator-=(const EMData &em) | EMAN::EMData | |
operator/=(float n) | EMAN::EMData | |
operator/=(const EMData &em) | EMAN::EMData | |
operator=(const EMData &that) | EMAN::EMData | |
operator==(const EMData &that) const | EMAN::EMData | |
pad_corner(float *pad_image) | EMAN::EMData | |
path | EMAN::EMData | [private] |
pathnum | EMAN::EMData | [private] |
peak_ccf(float hf_p) | EMAN::EMData | |
peak_search(int ml, float invert) | EMAN::EMData | |
peakcmp(const Pixel &p1, const Pixel &p2) | EMAN::EMData | [private, static] |
phase() const | EMAN::EMData | |
phase_cog() | EMAN::EMData | |
power(int n) const | EMAN::EMData | |
print_image(const string str=string(""), ostream &out=std::cout) | EMAN::EMData | |
process(const string &processorname, const Dict ¶ms=Dict()) const | EMAN::EMData | |
process(Processor *p) const | EMAN::EMData | |
process_inplace(const string &processorname, const Dict ¶ms=Dict()) | EMAN::EMData | |
process_inplace(Processor *p) | EMAN::EMData | |
project(const string &projector_name, const Dict ¶ms=Dict()) | EMAN::EMData | |
project(const string &projector_name, const Transform &t3d) | EMAN::EMData | |
rdata | EMAN::EMData | [mutable, private] |
read_binedimage(const string &filename, int img_index=0, int binfactor=0, bool fast=false, bool is_3d=false) | EMAN::EMData | |
read_data(string fsp, size_t loc, const Region *area=0, const int file_nx=0, const int file_ny=0, const int file_nz=0) | EMAN::EMData | |
read_image(const string &filename, int img_index=0, bool header_only=false, const Region *region=0, bool is_3d=false) | EMAN::EMData | |
read_images(const string &filename, vector< int >img_indices=vector< int >(), bool header_only=false) | EMAN::EMData | [static] |
read_images_ext(const string &filename, int img_index_start, int img_index_end, bool header_only=false, const string &ext="") | EMAN::EMData | [static] |
real() const | EMAN::EMData | |
real2complex(float img=0.0f) const | EMAN::EMData | |
real2FH(float OverSamplekB) | EMAN::EMData | |
render_amp24(int x, int y, int xsize, int ysize, int bpl, float scale, int min_gray, int max_gray, float min_render, float max_render, void *ref, void cmap(void *, int coord, unsigned char *tri)) | EMAN::EMData | |
render_amp8(int x, int y, int xsize, int ysize, int bpl, float scale, int min_gray, int max_gray, float min_render, float max_render, float gamma, int flags) | EMAN::EMData | |
render_ap24(int x, int y, int xsize, int ysize, int bpl, float scale, int min_gray, int max_gray, float min_render, float max_render, float gamma, int flags) | EMAN::EMData | |
replace_amplitudes(EMData *image, bool RetReal=true) | EMAN::EMData | |
restrict1(float x, int nx) | EMAN::EMData | [inline, static] |
restrict2(float x, int nx) | EMAN::EMData | [inline, static] |
ri2ap() | EMAN::EMData | |
ri2inten() | EMAN::EMData | |
rot_fp | EMAN::EMData | [mutable, private] |
rot_scale_conv(float ang, float delx, float dely, Util::KaiserBessel &kb, float scale=1.0) | EMAN::EMData | |
rot_scale_conv7(float ang, float delx, float dely, Util::KaiserBessel &kb, float scale_input) | EMAN::EMData | |
rot_scale_conv_new(float ang, float delx, float dely, Util::KaiserBessel &kb, float scale=1.0) | EMAN::EMData | |
rot_scale_conv_new_3D(float phi, float theta, float psi, float delx, float dely, float delz, Util::KaiserBessel &kb, float scale=1.0, bool wrap=false) | EMAN::EMData | |
rot_scale_conv_new_background(float ang, float delx, float dely, Util::KaiserBessel &kb, float scale=1.0) | EMAN::EMData | |
rot_scale_conv_new_background_3D(float phi, float theta, float psi, float delx, float dely, float delz, Util::KaiserBessel &kb, float scale=1.0, bool wrap=false) | EMAN::EMData | |
rot_scale_trans(const Transform &RA) | EMAN::EMData | |
rot_scale_trans2D(float ang, float delx=0.0f, float dely=0.0f, float scale=1.0f) | EMAN::EMData | |
rot_scale_trans2D_background(float ang, float delx=0.0f, float dely=0.0f, float scale=1.0f) | EMAN::EMData | |
rot_scale_trans_background(const Transform &RA) | EMAN::EMData | |
rotate(const Transform &t) | EMAN::EMData | |
rotate(float az, float alt, float phi) | EMAN::EMData | |
rotate_180() | EMAN::EMData | [inline] |
rotate_translate(const Transform &t) | EMAN::EMData | [inline] |
rotate_translate(float az, float alt, float phi, float dx, float dy, float dz) | EMAN::EMData | |
rotate_translate(float az, float alt, float phi, float dx, float dy, float dz, float pdx, float pdy, float pdz) | EMAN::EMData | |
rotate_x(int dx) | EMAN::EMData | |
rotavg() | EMAN::EMData | |
rotavg_i() | EMAN::EMData | |
save_byteorder_to_dict(ImageIO *imageio) | EMAN::EMData | [private] |
scale(float scale_factor) | EMAN::EMData | |
scale_pixel(float scale_factor) const | EMAN::EMData | |
set_array_offsets(const int xoff_=0, const int yoff_=0, const int zoff_=0) | EMAN::EMData | [inline] |
set_array_offsets(vector< int > offsets) | EMAN::EMData | [inline] |
set_attr(const string &key, EMObject val) | EMAN::EMData | |
set_attr_dict(const Dict &new_dict) | EMAN::EMData | |
set_attr_dict_explicit(const Dict &new_dict) | EMAN::EMData | [private] |
set_attr_python(const string &key, EMObject val) | EMAN::EMData | |
set_changecount(int c) | EMAN::EMData | [inline] |
set_col(const EMData *data, int col_index) | EMAN::EMData | |
set_complex(bool is_complex) | EMAN::EMData | [inline] |
set_complex_at(const int &x, const int &y, const std::complex< float > &val) | EMAN::EMData | |
set_complex_at(const int &x, const int &y, const int &z, const std::complex< float > &val) | EMAN::EMData | |
set_complex_size(int nx, int ny=1, int nz=1) | EMAN::EMData | [inline] |
set_complex_x(bool is_complex_x) | EMAN::EMData | [inline] |
set_ctf(Ctf *ctf) | EMAN::EMData | |
set_data(float *data, const int x, const int y, const int z) | EMAN::EMData | [inline] |
set_data(float *data) | EMAN::EMData | [inline] |
set_data_pickle(std::string vf) | EMAN::EMData | |
set_fftodd(bool is_fftodd) | EMAN::EMData | [inline] |
set_fftpad(bool is_fftpadded) | EMAN::EMData | [inline] |
set_FH(bool is_FH) | EMAN::EMData | [inline] |
set_flags(int f) | EMAN::EMData | [inline] |
set_flipped(bool is_flipped) | EMAN::EMData | [inline] |
set_nxc(int nxc) | EMAN::EMData | [inline] |
set_path(const string &new_path) | EMAN::EMData | [inline] |
set_pathnum(int n) | EMAN::EMData | [inline] |
set_ri(bool is_ri) | EMAN::EMData | [inline] |
set_rotation(float az, float alt, float phi) | EMAN::EMData | [inline] |
set_rotation(const Transform &t3d) | EMAN::EMData | [inline] |
set_row(const EMData *data, int row_index) | EMAN::EMData | |
set_shuffled(bool is_shuffled) | EMAN::EMData | [inline] |
set_size(int nx, int ny=1, int nz=1, bool noalloc=false) | EMAN::EMData | |
set_supp_pickle(int i) | EMAN::EMData | |
set_translation(const Vec3f &t) | EMAN::EMData | [inline] |
set_translation(float dx, float dy, float dz) | EMAN::EMData | [inline] |
set_value_at(int x, int y, int z, float v) | EMAN::EMData | [inline] |
set_value_at(int x, int y, float v) | EMAN::EMData | [inline] |
set_value_at(int x, float v) | EMAN::EMData | [inline] |
set_value_at_fast(int x, int y, int z, float v) | EMAN::EMData | [inline] |
set_value_at_fast(int x, int y, float v) | EMAN::EMData | [inline] |
set_value_at_fast(int x, float v) | EMAN::EMData | [inline] |
set_value_at_index(int i, float v) | EMAN::EMData | [inline] |
set_xyz_origin(float origin_x, float origin_y, float origin_z) | EMAN::EMData | |
set_xyzoff(int x, int y, int z) | EMAN::EMData | [inline] |
setup4slice(bool redo=true) | EMAN::EMData | |
sget_value_at(int x, int y, int z) const | EMAN::EMData | |
sget_value_at(int x, int y) const | EMAN::EMData | |
sget_value_at(size_t i) const | EMAN::EMData | |
sget_value_at_interp(float x, float y) const | EMAN::EMData | |
sget_value_at_interp(float x, float y, float z) const | EMAN::EMData | |
shuffle_pad_corner(float *pad_image) | EMAN::EMData | |
sqrt() const | EMAN::EMData | |
sub(float f) | EMAN::EMData | |
sub(const EMData &image) | EMAN::EMData | |
subsquare(const EMData &image) | EMAN::EMData | |
supp | EMAN::EMData | [private] |
symplane0(EMData *norm) | EMAN::EMData | |
symplane0_ctf(EMData *w) | EMAN::EMData | |
symplane0_rect(EMData *w) | EMAN::EMData | |
symplane1(EMData *norm, EMData *norm2) | EMAN::EMData | |
symplane2(EMData *norm, EMData *norm2, EMData *norm3) | EMAN::EMData | |
symvol(string symmetry) | EMAN::EMData | |
to_one() | EMAN::EMData | |
to_value(const float &value) | EMAN::EMData | |
to_zero() | EMAN::EMData | |
totalalloc | EMAN::EMData | [static] |
transform(const Transform &t) | EMAN::EMData | [inline] |
translate(float dx, float dy, float dz) | EMAN::EMData | |
translate(const Vec3f &translation) | EMAN::EMData | |
translate(int dx, int dy, int dz) | EMAN::EMData | |
translate(const Vec3i &translation) | EMAN::EMData | |
uncut_slice(EMData *const map, const Transform &tr) const | EMAN::EMData | |
unwrap(int r1=-1, int r2=-1, int xs=-1, int dx=0, int dy=0, bool do360=false, bool weight_radial=true) const | EMAN::EMData | |
unwrap_largerR(int r1, int r2, int xs, float rmax_f) | EMAN::EMData | |
update() | EMAN::EMData | [inline] |
update_stat() const | EMAN::EMData | [private] |
window_center(int l) | EMAN::EMData | |
WINDOW_IN_PLACE enum value | EMAN::EMData | |
WINDOW_OUT_OF_PLACE enum value | EMAN::EMData | |
WINDOWPLACE enum name | EMAN::EMData | |
write_data(string fsp, size_t loc, const Region *const area=0, const int file_nx=0, const int file_ny=0, const int file_nz=0) | EMAN::EMData | |
write_image(const string &filename, int img_index=0, EMUtil::ImageType imgtype=EMUtil::IMAGE_UNKNOWN, bool header_only=false, const Region *region=0, EMUtil::EMDataType filestoragetype=EMUtil::EM_FLOAT, bool use_host_endian=true) | EMAN::EMData | |
write_lst(const string &filename, const string &reffile="", int refn=-1, const string &comment="") | EMAN::EMData | |
xform_align_nbest(const string &aligner_name, EMData *to_img, const Dict ¶ms=Dict(), const unsigned int nsoln=1, const string &cmp_name="dot", const Dict &cmp_params=Dict()) | EMAN::EMData | |
xoff | EMAN::EMData | [private] |
yoff | EMAN::EMData | [private] |
zero_corner_circulant(const int radius=0) | EMAN::EMData | |
zoff | EMAN::EMData | [private] |
~EMData() | EMAN::EMData | |