EMAN::DiffBlockProcessor Class Reference

averages over cal_half_width, then sets the value in a local block More...

#include <processor.h>

Inheritance diagram for EMAN::DiffBlockProcessor:

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Collaboration diagram for EMAN::DiffBlockProcessor:

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List of all members.

Public Member Functions

void process_inplace (EMData *image)
 To process an image in-place.
string get_name () const
 Get the processor's name.
string get_desc () const
 Get the descrition of this specific processor.
TypeDict get_param_types () const
 Get processor parameter information in a dictionary.

Static Public Member Functions

static ProcessorNEW ()

Static Public Attributes

static const string NAME = "eman1.filter.blockrange"

Detailed Description

averages over cal_half_width, then sets the value in a local block

Parameters:
cal_half_width cal_half_width is dx/dy for calculating an average
fill_half_width fill_half_width is dx/dy for fill/step

Definition at line 3231 of file processor.h.


Member Function Documentation

string EMAN::DiffBlockProcessor::get_desc (  )  const [inline, virtual]

Get the descrition of this specific processor.

This function must be overwritten by a subclass.

Returns:
The description of this processor.

Implements EMAN::Processor.

Definition at line 3245 of file processor.h.

03246                 {
03247                         return "averages over cal_half_width, then sets the value in a local block";
03248                 }

string EMAN::DiffBlockProcessor::get_name (  )  const [inline, virtual]

Get the processor's name.

Each processor is identified by a unique name.

Returns:
The processor's name.

Implements EMAN::Processor.

Definition at line 3236 of file processor.h.

References NAME.

Referenced by process_inplace().

03237                 {
03238                         return NAME;
03239                 }

TypeDict EMAN::DiffBlockProcessor::get_param_types (  )  const [inline, virtual]

Get processor parameter information in a dictionary.

Each parameter has one record in the dictionary. Each record contains its name, data-type, and description.

Returns:
A dictionary containing the parameter info.

Reimplemented from EMAN::Processor.

Definition at line 3250 of file processor.h.

References EMAN::EMObject::FLOAT, and EMAN::TypeDict::put().

03251                 {
03252                         TypeDict d;
03253                         d.put("cal_half_width", EMObject::FLOAT, "cal_half_width is dx/dy for calculating an average");
03254                         d.put("fill_half_width", EMObject::FLOAT, "fill_half_width is dx/dy for fill/step");
03255                         return d;
03256                 }

static Processor* EMAN::DiffBlockProcessor::NEW (  )  [inline, static]

Definition at line 3240 of file processor.h.

03241                 {
03242                         return new DiffBlockProcessor();
03243                 }

void DiffBlockProcessor::process_inplace ( EMData image  )  [virtual]

To process an image in-place.

For those processors which can only be processed out-of-place, override this function to just print out some error message to remind user call the out-of-place version.

Parameters:
image The image to be processed.

Implements EMAN::Processor.

Definition at line 1812 of file processor.cpp.

References data, EMAN::EMData::get_data(), get_name(), EMAN::EMData::get_xsize(), EMAN::EMData::get_ysize(), EMAN::EMData::get_zsize(), ImageDimensionException, LOGERR, LOGWARN, mean(), nx, ny, EMAN::Processor::params, EMAN::EMData::update(), v0, x, and y.

01813 {
01814         if (!image) {
01815                 LOGWARN("NULL Image");
01816                 return;
01817         }
01818 
01819         int nz = image->get_zsize();
01820 
01821         if (nz > 1) {
01822                 LOGERR("%s Processor doesn't support 3D", get_name().c_str());
01823                 throw ImageDimensionException("3D model not supported");
01824         }
01825 
01826         int nx = image->get_xsize();
01827         int ny = image->get_ysize();
01828 
01829         int v1 = params["cal_half_width"];
01830         int v2 = params["fill_half_width"];
01831 
01832         int v0 = v1 > v2 ? v1 : v2;
01833 
01834         if (v2 <= 0) {
01835                 v2 = v1;
01836         }
01837 
01838         float *data = image->get_data();
01839 
01840         for (int y = v0; y <= ny - v0 - 1; y += v2) {
01841                 for (int x = v0; x <= nx - v0 - 1; x += v2) {
01842 
01843                         float sum = 0;
01844                         for (int y1 = y - v1; y1 <= y + v1; y1++) {
01845                                 for (int x1 = x - v1; x1 <= x + v1; x1++) {
01846                                         sum += data[x1 + y1 * nx];
01847                                 }
01848                         }
01849                         float mean = sum / ((v1 * 2 + 1) * (v1 * 2 + 1));
01850 
01851                         for (int j = y - v2; j <= y + v2; j++) {
01852                                 for (int i = x - v2; i <= x + v2; i++) {
01853                                         data[i + j * nx] = mean;
01854                                 }
01855                         }
01856                 }
01857         }
01858 
01859         image->update();
01860 }


Member Data Documentation

const string DiffBlockProcessor::NAME = "eman1.filter.blockrange" [static]

Definition at line 3258 of file processor.h.

Referenced by get_name().


The documentation for this class was generated from the following files:
Generated on Tue Jun 11 12:44:00 2013 for EMAN2 by  doxygen 1.4.7