- cache_au_planes()
: EMAN::Symmetry3D
- calc_amp1()
: EMAN::EMAN2Ctf, EMAN::EMAN1Ctf
- calc_amplitude()
: EMAN::EMAN2Ctf, EMAN::EMAN1Ctf
- calc_az_dist()
: EMAN::EMData
- calc_bessel()
: EMAN::Util
- calc_best_fft_size()
: EMAN::Util
- calc_bilinear_least_square()
: EMAN::Util
- calc_ccf()
: EMAN::EMData
- calc_ccfx()
: EMAN::EMData
- calc_center_density()
: EMAN::EMData
- calc_center_of_mass()
: EMAN::EMData
- calc_correlation()
: EMAN::XYData
- calc_ctf1()
: EMAN::EMAN2Ctf, EMAN::EMAN1Ctf
- calc_dist()
: EMAN::EMData
- calc_fast_sigma_image()
: EMAN::EMData
- calc_flcf()
: EMAN::EMData
- calc_fourier_shell_correlation()
: EMAN::EMData
- calc_g1()
: EMAN::EMAN2Ctf, EMAN::EMAN1Ctf
- calc_g2()
: EMAN::EMAN2Ctf, EMAN::EMAN1Ctf
- calc_gamma()
: EMAN::EMAN2Ctf, EMAN::EMAN1Ctf
- calc_highest_locations()
: EMAN::EMData
- calc_hist()
: EMAN::EMData
- calc_lambda()
: EMAN::EMAN2Ctf, EMAN::EMAN1Ctf
- calc_least_square_fit()
: EMAN::Util
- calc_locals()
: EMAN::MaskGaussInvProcessor, EMAN::MaskEdgeMeanProcessor, EMAN::CircularMaskProcessor, EMAN::CoordinateProcessor, EMAN::RealPixelProcessor
- calc_max_index()
: EMAN::EMData
- calc_max_location()
: EMAN::EMData
- calc_max_location_wrap()
: EMAN::EMData
- calc_max_location_wrap_intp()
: EMAN::EMData
- calc_mean()
: EMAN::NormalizeMaxMinProcessor, EMAN::NormalizeLREdgeMeanProcessor, EMAN::NormalizeCircleMeanProcessor, EMAN::NormalizeEdgeMeanProcessor, EMAN::NormalizeMaskProcessor, EMAN::NormalizeStdProcessor, EMAN::NormalizeUnitSumProcessor, EMAN::NormalizeUnitProcessor, EMAN::NormalizeProcessor
- calc_min_index()
: EMAN::EMData
- calc_min_location()
: EMAN::EMData
- calc_mutual_correlation()
: EMAN::EMData
- calc_n_highest_locations()
: EMAN::EMData
- calc_noise()
: EMAN::EMAN2Ctf, EMAN::EMAN1Ctf
- calc_radial_dist()
: EMAN::EMData
- calc_ref_image_index()
: EMAN::LstIO, EMAN::LstFastIO
- calc_sigma()
: EMAN::NormalizeMaxMinProcessor, EMAN::NormalizeMaskProcessor, EMAN::NormalizeUnitSumProcessor, EMAN::NormalizeUnitProcessor, EMAN::NormalizeProcessor
- calc_sigma_diff()
: EMAN::EMData
- calc_snr()
: EMAN::EMAN1Ctf
- calculate_min_max_vals()
: EMAN::MarchingCubes
- calculate_surface()
: EMAN::MarchingCubes
- call_cl1()
: EMAN::Util
- CANG()
: EMAN::Util
- cb2sph()
: EMAN::ChaoProjector
- ccc_images()
: EMAN::Util
- ccc_images_G()
: EMAN::Util
- cconj()
: EMAN::EMData
- center_origin()
: EMAN::EMData
- center_origin_fft()
: EMAN::EMData
- center_origin_yz()
: EMAN::EMData
- center_to_zero()
: EMAN::PointArray
- change_filename_ext()
: EMAN::Util
- check_file_by_magic()
: EMAN::Util
- check_image()
: EMAN::TestUtil
- check_read_access()
: EMAN::ImageIO
- check_region()
: EMAN::ImageIO
- check_write_access()
: EMAN::ImageIO
- CircularMaskProcessor()
: EMAN::CircularMaskProcessor
- cl1()
: EMAN::Util
- ClampingProcessor()
: EMAN::ClampingProcessor
- classify()
: EMAN::BoxingTools
- CleanUpSkeleton()
: wustl_mm::GraySkeletonCPP::VolumeSkeletonizer
- clear()
: EMAN::PCA, EMAN::FourierPlaneReconstructor, EMAN::FourierReconstructor, EMAN::Reconstructor, EMAN::CustomVector< type >, EMAN::Dict
- clear_min_max_vals()
: EMAN::MarchingCubes
- clearupdate()
: EMAN::EMData
- clip_inplace()
: EMAN::EMData
- ClipInplaceVariables()
: EMAN::EMData::ClipInplaceVariables
- cluster_equalsize()
: EMAN::Util
- cluster_pairwise()
: EMAN::Util
- cm_euc()
: EMAN::EMData
- cml_disc()
: EMAN::Util
- cml_init_rot()
: EMAN::Util
- cml_line_in3d()
: EMAN::Util
- cml_line_insino()
: EMAN::Util
- cml_line_insino_all()
: EMAN::Util
- cml_prepare_line()
: EMAN::Util
- cml_spin_psi()
: EMAN::Util
- cml_spin_psi_now()
: EMAN::Util
- cml_update_rot()
: EMAN::Util
- cml_weights()
: EMAN::Util
- cmp()
: EMAN::XYZCmp, EMAN::EMData, EMAN::FRCCmp, EMAN::PhaseCmp, EMAN::OptVarianceCmp, EMAN::QuadMinDotCmp, EMAN::TomoFscCmp, EMAN::TomoCccCmp, EMAN::DotCmp, EMAN::SqEuclideanCmp, EMAN::LodCmp, EMAN::CccCmp, EMAN::Cmp
- cmp1()
: EMAN::Util
- cmp2()
: EMAN::Util
- cmplx()
: EMAN::EMData
- cog()
: EMAN::EMData
- color_vertices()
: EMAN::MarchingCubes
- colored_rectangle()
: EMAN::GLUtil
- colorMappingByClassSize()
: EMAN::BoxSVDClassifier
- ColorRGBGenerator()
: EMAN::ColorRGBGenerator
- colreverse()
: EMAN::Util
- column()
: EMAN::Matrix4, EMAN::Matrix3
- common_lines()
: EMAN::EMData
- common_lines_real()
: EMAN::EMData
- components26()
: wustl_mm::SkeletonMaker::Volume
- components6()
: wustl_mm::SkeletonMaker::Volume
- compress_image_mask()
: EMAN::Util
- compute_1d()
: EMAN::EMAN2Ctf, EMAN::EMAN1Ctf, EMAN::Ctf
- compute_2d_complex()
: EMAN::EMAN2Ctf, EMAN::EMAN1Ctf, EMAN::Ctf
- compute_2d_real()
: EMAN::EMAN2Ctf, EMAN::EMAN1Ctf, EMAN::Ctf
- compute_missingwedge()
: EMAN::EMData
- conj()
: EMAN::Quaternion
- conjg()
: EMAN::EMData
- const_iterator()
: EMAN::Dict::const_iterator
- constrained_helix()
: EMAN::Util
- constrained_helix_test()
: EMAN::Util
- contour_isosurface()
: EMAN::GLUtil
- convolute()
: EMAN::EMData
- ConvolutionProcessor()
: EMAN::ConvolutionProcessor
- CoordinateProcessor()
: EMAN::CoordinateProcessor
- copy()
: EMAN::PointArray, EMAN::PDBReader, EMAN::EMData
- copy_empty_head()
: EMAN::EMData
- copy_exclude_keys()
: EMAN::Dict
- copy_exclusive_keys()
: EMAN::Dict
- copy_from()
: EMAN::EMAN2Ctf, EMAN::EMAN1Ctf, EMAN::Ctf
- copy_head()
: EMAN::EMData
- copy_keys_in()
: EMAN::Dict
- copy_matrix_into_array()
: EMAN::Transform
- copy_relevant_params()
: EMAN::FactoryBase
- countExt()
: wustl_mm::SkeletonMaker::Volume
- countInt()
: wustl_mm::SkeletonMaker::Volume
- countIntEuler()
: wustl_mm::SkeletonMaker::Volume
- coveig()
: EMAN::Util
- coveig_for_py()
: EMAN::Util
- create_inverse()
: EMAN::Quaternion
- create_kernel()
: EMAN::ZeroConstantProcessor, EMAN::LaplacianProcessor, EMAN::AreaProcessor
- create_processor_image()
: EMAN::ImageProcessor
- create_radial_func()
: EMAN::SetSFProcessor, EMAN::MatchSFProcessor, EMAN::DoGFourierProcessor, EMAN::LoGFourierProcessor, EMAN::LinearRampProcessor, EMAN::HighpassAutoPeakProcessor, EMAN::LowpassAutoBProcessor, EMAN::LowpassRandomPhaseProcessor, EMAN::LinearRampFourierProcessor, EMAN::FourierAnlProcessor, EMAN::FourierProcessor
- Crosrng_e()
: EMAN::Util
- Crosrng_ew()
: EMAN::Util
- Crosrng_ms()
: EMAN::Util
- Crosrng_ms_delta()
: EMAN::Util
- Crosrng_msg()
: EMAN::Util
- Crosrng_msg_m()
: EMAN::Util
- Crosrng_msg_s()
: EMAN::Util
- Crosrng_msg_vec()
: EMAN::Util
- Crosrng_msg_vec_p()
: EMAN::Util
- Crosrng_ns()
: EMAN::Util
- Crosrng_psi()
: EMAN::Util
- Crosrng_sm_psi()
: EMAN::Util
- cross()
: EMAN::Vec3< Type >
- CSym()
: EMAN::CSym
- ctf2_rimg()
: EMAN::Util
- ctf_img()
: EMAN::Util
- ctf_rimg()
: EMAN::Util
- CtfCAutoAverager()
: EMAN::CtfCAutoAverager
- CtfCWautoAverager()
: EMAN::CtfCWautoAverager
- CUDA_Aligner()
: EMAN::CUDA_Aligner
- cuda_available()
: EMAN::EMUtil
- CUDA_multiref_aligner()
: EMAN::CUDA_multiref_aligner
- curveSkeleton()
: wustl_mm::SkeletonMaker::Volume
- curveSkeleton2D()
: wustl_mm::SkeletonMaker::Volume
- CustomVector()
: EMAN::CustomVector< type >
- cut_slice()
: EMAN::EMData
- cyclicshift()
: EMAN::Util
Generated on Tue Jun 11 12:42:13 2013 for EMAN2 by
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