Differences between revisions 20 and 42 (spanning 22 versions)
Revision 20 as of 2009-07-22 16:06:53
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Editor: bcm-9-141
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Revision 42 as of 2011-06-09 14:35:08
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Editor: SteveLudtke
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General: You can also check our [[http://blake.bcm.edu/bugzilla/|bug tracking system]]
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 * [[EMAN2/FAQ/UseEman2|Can I use EMAN2 to do refinements yet ?]]
Installation
'''General:'''
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 * [[EMAN2/FAQ/UseEman2_OSX|EMAN2 installed under OSX doesn't work properly. Any suggestions?]]
 * [[EMAN2/FAQ/UseEman2_Windows|EMAN2 installed under Windows doesn't work properly. Any suggestions?]]
 * [[EMAN2/FAQ/UseEman2_Ubuntu|EMAN2 installed under Ubuntu 8.04 Linux doesn't work properly. Any suggestions?]]
  * [[Ubuntu_8.10_error_running_e2.py]]
Program Specific FAQ
 * [[EMAN2/FAQ/CiteEman2|What paper should I cite if I use EMAN2 for a reconstruction]]

'''Installation'''

 * Installation FAQs can be found on the [[EMAN2/Install|Installation]] page.

'''BDB Issues '''
 * [[EMAN2/FAQ/NfsBdb|We use NFS-mounted directories, how can I safely use EMAN2 with it's BDB system]]
 * [[EMAN2/FAQ/BdbConvert|How can I convert these funny 'bdb' files into something I can use in Chimera or other software ?]]
 * [[EMAN2/FAQ/BdbErrors|I'm getting funny errors that seem to be related to BDB. What do I do ???]]
 * [[EMAN2/FAQ/BdbVstack|Can I make a vstack from another vstack, including only a subset of the images ? What will this do ?]]


'''Refinement Issues'''

 * [[EMAN2/FAQ/Symmetry|What symmetry should I use for my particle if I don't know what it is ?]]
 * [[EMAN2/FAQ/AutoMask|How do I pick the correct parameters for automasking during refinement or using the mask.auto3d processor]]
 * [[EMAN2/FAQ/ChangeBoxSize|I just decided that my box size is too large, and I want to make it smaller, how can I do this without making a mess ?]]
 * [[EMAN2/FAQ/InvertData|I just realized that I forgot to invert my data. I see black protein on a white background. What do I do ?]]
 * [[EMAN2/FAQ/FSC|I computed my FSC curves and they look funny, what's going on, and how can I get them to look better]]

'''Program Specific FAQ'''
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'''Programming FAQ'''

 * [[EMAN2MakingVolumes|Is there a way to build a volume EMData object from a set of slices ?]]

'''EMAN2 and other software'''

 * [[EMAN2/FAQ/SpiderEuler|Can I convert EMAN2 Euler angles from e2initialmodel.py to Spider (or other) convention ?]]

Please ask your EMAN2 specific questions here. It is monitored, and one of the EMAN2 developers should post a reply. You can subscribe to any page to get an email announcement when a change is made to specific pages.

You can also check our bug tracking system

General:

Installation

BDB Issues

Refinement Issues

Program Specific FAQ

Programming FAQ

EMAN2 and other software

EMAN2/FAQ (last edited 2016-11-03 19:18:04 by SteveLudtke)