Differences between revisions 15 and 75 (spanning 60 versions)
⇤ ← Revision 15 as of 2008-11-26 04:42:28 →
Size: 1637
Editor: localhost
Comment: converted to 1.6 markup
← Revision 75 as of 2024-09-13 17:36:10 → ⇥
Size: 1753
Editor: TunayDurmaz
Comment: MiniForge
Deletions are marked like this. Additions are marked like this.
Line 1: Line 1:
= Compiling and installing EMAN =
'''Most users, even 'advanced' users should select a binary install.''' If the binaries don't work for you for some reason (please [[mailto:sludtke@bcm.edu|let us know]], or if you need to write new low-level image processing functions, then you can resort to a source-based installation.)		 = Installing EMAN2 / SPHIRE =
Line 4: Line 3:
EMAN2 uses an increasingly popular approach of writing all of the main computationally intensive image processing operations in C++, but writing all of the user programs, including those with GUIs (graphical user interfaces) in a scripting language called [[http://www.python.org|Python]]. All of these Python level programs can be edited by the end-user WITHOUT requiring a C++ development environment. Note that most users won't want or need even this level of customization. === Conda Installation of eman-dev ===
Line 6: Line 5:
=== Binary Installation ===
 * [[EMAN2/Install/BinaryInstall|Installing EMAN2 binaries]]
=== Compiling from source and setting up a C++ development environment ===
 * [[http://blake.bcm.tmc.edu/eman/eman2/INSTALL|EMAN2's non-wiki installation instructions]] (Linux)
 * [[COMPILE_EMAN2_WINDOWS|Compile EMAN2 with Visual Studio .NET 2005 on Windows XP]]
 * [[COMPILE_EMAN2_MAC_OS_X|Compile EMAN2 on OS X]]
 * [[COMPILE_EMAN2_Fedora_9|Compile EMAN2 on Fedora 9: use yum to solve dependency issue]]
=== FAQ ===
 * [[eman2BuildFAQ|EMAN2 compilation frequent asked questions]]
 * [[EMAN2_unittest|How do I know my EMAN2 installation or compilation is successful?]]
 * [[Py_initModule4_64|I try to run eman2 script, got error like "ImportError: ....libboost....: undefined symbol: Py_InitModule4_64", what does that mean?]]		 [[EMAN2/Install/CondaInstall|Install EMAN2 in a conda environment]]


=== Binary Installation (most users should do this) ===

[[EMAN2/Install/BinaryInstallAnaconda|Install EMAN2 binaries]]


=== Compiling from Source and Setting Up a C++ Development Environment ===

EMAN2 source is hosted on [[http://github.com/cryoem/eman2|GitHub:cryoem/eman2]], follow instructions below:

 * [[EMAN2/Install/SourceInstall|Compile EMAN2 with MiniForge (Linux and OSX) (recommended)]]

==== For older versions ====
 * [[EMAN2/COMPILE_EMAN2_LINUX|Compile EMAN2 on Linux]] | EMAN2's [[http://blake.bcm.tmc.edu/eman/eman2/INSTALL|non-wiki]] installation instructions
 * [[EMAN2/COMPILE_EMAN2_MAC_OS_X|Compile EMAN2 on OS X with Anaconda]] (older version)
 * [[EMAN2/BREW_EMAN2_MAC_OS_X|Compile EMAN2 on OS X with Homebrew]] (not recommended)
 * [[COMPILE_EMAN2_VS2008|Compile EMAN2 with Visual Studio 2008 on Win7 32bit]]
 * [[EMAN2/COMPILE_EMAN2_WINDOWS|Compile EMAN2 with Visual Studio .NET 2005 on Windows XP (OBSOLETE)]]

=== FAQ (Outdated) ===
 * [[EMAN2/FAQ/eman2BuildFAQ|EMAN2 compilation frequent asked questions]]
 * [[EMAN2/FAQ/EMAN2_unittest|How do I know my EMAN2 installation or compilation is successful?]]
 * [[EMAN2/FAQ/International|Does EMAN2 support Internationalization/other language conventions ?]]
 * [[EMAN2/FAQ/ClusterInstall|Why is EMAN2 distributed as an 'EMAN2' directory rather than Linux RPM's, etc. ?]]
 * [[EMAN2/FAQ/UseEman2_OSX|EMAN2 installed under OSX doesn't work properly. Any suggestions?]]
 * [[EMAN2/FAQ/UseEman2_Windows|EMAN2 installed under Windows doesn't work properly. Any suggestions?]]

{{attachment:icos_saff.png}}

Installing EMAN2 / SPHIRE

Conda Installation of eman-dev

Install EMAN2 in a conda environment

Binary Installation (most users should do this)

Install EMAN2 binaries

Compiling from Source and Setting Up a C++ Development Environment

EMAN2 source is hosted on GitHub:cryoem/eman2, follow instructions below:

For older versions

FAQ (Outdated)

icos_saff.png

EMAN2/Install (last edited 2024-09-13 17:36:10 by TunayDurmaz)